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  5. Pp3c14_24540V3.1

Pp3c14_24540V3.1 (ATSAP18, SAP18, Pp3c14_24540)


Aliases : ATSAP18, SAP18, Pp3c14_24540

Description : SIN3 associated polypeptide P18


Gene families : OG0004148 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004148_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c14_24540V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00193310 ATSAP18, SAP18,... Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
Als_g26705 ATSAP18, SAP18 associated component *(SAP18) of histone deacetylase... 0.01 OrthoFinder output from all 47 species
Aspi01Gene08904.t1 ATSAP18, SAP18,... associated component *(SAP18) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000663.51 ATSAP18, SAP18 Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder output from all 47 species
Cre09.g404400 ATSAP18, SAP18 Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
LOC_Os02g02960.4 ATSAP18, SAP18,... associated component SAP18 of histone deacetylase machineries 0.01 OrthoFinder output from all 47 species
Spa_g17186 ATSAP18, SAP18 associated component *(SAP18) of histone deacetylase... 0.01 OrthoFinder output from all 47 species
Tin_g30788 ATSAP18, SAP18 associated component *(SAP18) of histone deacetylase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010516 SAP18 38 156
No external refs found!