Aliases : Pp3c14_10480
Description : Ribosomal L28e protein family
Gene families : OG0000910 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000910_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00036p00210210 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | OrthoFinder output from all 47 species | |
AT2G19730 | No alias | Ribosomal L28e protein family | 0.21 | OrthoFinder output from all 47 species | |
AT4G29410 | No alias | Ribosomal L28e protein family | 0.23 | OrthoFinder output from all 47 species | |
Adi_g025175 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
Adi_g025177 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g029567 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g073738 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g03520 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g00426 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
Als_g19634 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Als_g23593 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
Als_g30166 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
Aob_g04591 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g29494 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
Aob_g35789 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g37483 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
Aop_g00977 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.13 | OrthoFinder output from all 47 species | |
Aop_g41455 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g47530 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
Aop_g66247 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0191.g057028 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g69046 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
Ceric.25G035500.1 | Ceric.25G035500 | component *(eL28) of large ribosomal-subunit (LSU)... | 0.15 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020710.93 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.12 | OrthoFinder output from all 47 species | |
Cre11.g467578 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.23 | OrthoFinder output from all 47 species | |
Dac_g03084 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g26158 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
Dcu_g14613 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
Dcu_g27550 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
Dde_g08723 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g03161 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01016895001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.24 | OrthoFinder output from all 47 species | |
GSVIVT01035350001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | OrthoFinder output from all 47 species | |
Gb_38783 | No alias | component RPL28 of LSU proteome component | 0.15 | OrthoFinder output from all 47 species | |
LOC_Os01g51020.1 | LOC_Os01g51020 | component RPL28 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g57540.1 | LOC_Os02g57540 | component RPL28 of LSU proteome component | 0.2 | OrthoFinder output from all 47 species | |
LOC_Os05g46430.1 | LOC_Os05g46430 | component RPL28 of LSU proteome component | 0.19 | OrthoFinder output from all 47 species | |
Len_g16638 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g00141 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g24992 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
MA_10428490g0010 | No alias | component RPL28 of LSU proteome component | 0.11 | OrthoFinder output from all 47 species | |
Mp1g26940.1 | No alias | component RPL28 of LSU proteome component | 0.19 | OrthoFinder output from all 47 species | |
Msp_g10686 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
Msp_g36633 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g38772 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g38943 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
Nbi_g01990 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
Nbi_g33242 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
Pir_g03637 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Pir_g60467 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g62486 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g14043 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g19107 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g19271 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g25867 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g25899 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g34867 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0275.g027057 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
Sam_g05292 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g05465 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g05602 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g06118 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g06119 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
Sam_g14505 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
Sam_g18296 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
Sam_g31492 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g37199 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g43777 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g46661 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g48404 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Smo164298 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.11 | OrthoFinder output from all 47 species | |
Solyc03g121330.3.1 | Solyc03g121330 | component RPL28 of LSU proteome component | 0.19 | OrthoFinder output from all 47 species | |
Solyc06g062500.4.1 | Solyc06g062500 | component RPL28 of LSU proteome component | 0.13 | OrthoFinder output from all 47 species | |
Solyc12g044720.2.1 | Solyc12g044720 | component RPL28 of LSU proteome component | 0.11 | OrthoFinder output from all 47 species | |
Spa_g19251 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
Spa_g21825 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.13 | OrthoFinder output from all 47 species | |
Tin_g35509 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
Tin_g40565 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e026410_P001 | Zm00001e026410 | component RPL28 of LSU proteome component | 0.23 | OrthoFinder output from all 47 species | |
Zm00001e032283_P002 | Zm00001e032283 | component RPL28 of LSU proteome component | 0.26 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0019843 | rRNA binding | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR029004 | L28e/Mak16 | 45 | 164 |
No external refs found! |