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  5. Pp3c13_2420V3.1

Pp3c13_2420V3.1 (Pp3c13_2420)


Aliases : Pp3c13_2420

Description : EF hand calcium-binding protein family


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_2420V3.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AT1G18210 No alias Calcium-binding EF-hand family protein 0.01 OrthoFinder output from all 47 species
AT3G03430 No alias Calcium-binding EF-hand family protein 0.01 OrthoFinder output from all 47 species
Aev_g43415 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13968 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g12792 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g34152 UNE14 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g57972 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g00912 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g04492 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g37370 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.23G032100.1 Ceric.23G032100 calcium sensor *(CML) & original description:... 0.01 OrthoFinder output from all 47 species
Dac_g39853 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g00276 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g03528 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03800 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g11523 TCH3, ATCAL4 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27059 TCH2, CML24 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g04330.1 LOC_Os01g04330 Probable calcium-binding protein CML16 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
LOC_Os01g72080.1 LOC_Os01g72080 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g72100.1 LOC_Os01g72100 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
LOC_Os05g31620.1 LOC_Os05g31620 Probable calcium-binding protein CML15 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Lfl_g30167 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g14930.1 CML23 Probable calcium-binding protein CML23 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Pnu_g33633 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g091500.1.1 Solyc02g091500 Calcium-binding protein CML24 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc03g118810.1.1 Solyc03g118810 Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.02 OrthoFinder output from all 47 species
Solyc04g018110.1.1 Solyc04g018110 Probable calcium-binding protein CML35 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Solyc06g068960.1.1 Solyc06g068960 Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.02 OrthoFinder output from all 47 species
Solyc10g079755.1.1 Solyc10g079755 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Spa_g27602 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016987_P001 Zm00001e016987 Probable calcium-binding protein CML16 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e018643_P001 Zm00001e018643 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 36 93
IPR002048 EF_hand_dom 119 181
No external refs found!