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  5. Pp3c13_23540V3.1

Pp3c13_23540V3.1 (HTB1, Pp3c13_23540)


Aliases : HTB1, Pp3c13_23540

Description : Histone superfamily protein


Gene families : OG0000176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_23540V3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G07790 HTB1 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G45980 HTB9, H2B Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G46030 HTB11 Histone superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G22880 HTB2, H2B histone B2 0.01 OrthoFinder output from all 47 species
AT5G59910 HTB4 Histone superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g021863 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g032961 HTB4 histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g102459 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05666 No alias histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g56283 No alias histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0019.g015129 HTB4 histone *(H2B) & original description: CDS=1-441 0.01 OrthoFinder output from all 47 species
Ceric.03G007900.1 HTB4, Ceric.03G007900 histone *(H2B) & original description: pacid=50571513... 0.03 OrthoFinder output from all 47 species
Ceric.12G022200.1 HTB4, Ceric.12G022200 histone *(H2B) & original description: pacid=50601405... 0.03 OrthoFinder output from all 47 species
Ceric.20G039500.1 HTB4, Ceric.20G039500 histone *(H2B) & original description: pacid=50566293... 0.01 OrthoFinder output from all 47 species
Ceric.20G076900.1 HTB4, Ceric.20G076900 histone *(H2B) & original description: pacid=50566872... 0.03 OrthoFinder output from all 47 species
Ceric.24G053000.1 HTB4, Ceric.24G053000 histone *(H2B) & original description: pacid=50628469... 0.01 OrthoFinder output from all 47 species
Ceric.24G053100.1 HTB4, Ceric.24G053100 histone *(H2B) & original description: pacid=50628870... 0.01 OrthoFinder output from all 47 species
Ceric.27G028800.1 HTB4, Ceric.27G028800 histone *(H2B) & original description: pacid=50605139... 0.01 OrthoFinder output from all 47 species
Ceric.27G029200.1 Ceric.27G029200 histone *(H2B) & original description: pacid=50606171... 0.01 OrthoFinder output from all 47 species
Ceric.29G074100.1 HTB4, Ceric.29G074100 histone *(H2B) & original description: pacid=50624840... 0.01 OrthoFinder output from all 47 species
Ceric.29G074200.1 HTB4, Ceric.29G074200 histone *(H2B) & original description: pacid=50625405... 0.01 OrthoFinder output from all 47 species
Ceric.29G085900.1 HTB4, Ceric.29G085900 histone *(H2B) & original description: pacid=50624351... 0.01 OrthoFinder output from all 47 species
Cre06.g264800 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g264900 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g266750 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g271376 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g273850 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g274250 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g275800 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g276550 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g276900 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g504550 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g504700 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g505600 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g506200 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre13.g570050 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g709150 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g710450 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g711750 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g714050 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Dac_g17045 HTB4 histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g19092 HTB4 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_02245 HTB11 histone (H2B) 0.01 OrthoFinder output from all 47 species
Gb_12082 No alias histone (H2B) 0.02 OrthoFinder output from all 47 species
Gb_12096 No alias histone (H2B) 0.02 OrthoFinder output from all 47 species
Gb_26315 HTB11 histone (H2B) 0.01 OrthoFinder output from all 47 species
Gb_32754 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
Gb_41508 HTB4 histone (H2B) 0.01 OrthoFinder output from all 47 species
LOC_Os01g05610.1 HTB11, LOC_Os01g05610 histone (H2B) 0.02 OrthoFinder output from all 47 species
LOC_Os01g05900.1 HTB11, LOC_Os01g05900 histone (H2B) 0.01 OrthoFinder output from all 47 species
LOC_Os01g06010.1 HTB11, LOC_Os01g06010 histone (H2B) 0.02 OrthoFinder output from all 47 species
LOC_Os01g62230.1 LOC_Os01g62230 histone (H2B) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49860.1 HTB11, LOC_Os05g49860 histone (H2B) 0.01 OrthoFinder output from all 47 species
LOC_Os08g38300.1 HTB11, LOC_Os08g38300 histone (H2B) 0.02 OrthoFinder output from all 47 species
Len_g38386 HTB4 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23041 No alias histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
MA_10151143g0010 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
MA_10428006g0010 HTB11 histone (H2B) 0.01 OrthoFinder output from all 47 species
MA_10428006g0030 No alias histone (H2B) 0.02 OrthoFinder output from all 47 species
MA_10435143g0010 No alias histone (H2B) 0.01 OrthoFinder output from all 47 species
MA_8065g0010 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
MA_9293473g0010 HTB11 histone (H2B) 0.04 OrthoFinder output from all 47 species
Mp6g04070.1 No alias histone (H2B) 0.01 OrthoFinder output from all 47 species
Ppi_g60086 No alias histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Smo182308 HTB4 Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
Smo7113 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Solyc02g038690.1.1 HTB4, Solyc02g038690 histone (H2B) 0.01 OrthoFinder output from all 47 species
Solyc03g071620.2.1 Solyc03g071620 histone (H2B) 0.01 OrthoFinder output from all 47 species
Solyc05g055440.1.1 HTB11, Solyc05g055440 histone (H2B) 0.01 OrthoFinder output from all 47 species
Solyc06g074780.1.1 HTB4, Solyc06g074780 histone (H2B) 0.01 OrthoFinder output from all 47 species
Solyc06g074790.2.1 HTB11, Solyc06g074790 histone (H2B) 0.01 OrthoFinder output from all 47 species
Solyc06g075800.1.1 HTB11, Solyc06g075800 histone (H2B) 0.02 OrthoFinder output from all 47 species
Solyc11g007920.1.1 HTB11, Solyc11g007920 histone (H2B) 0.02 OrthoFinder output from all 47 species
Solyc11g007930.1.1 HTB11, Solyc11g007930 histone (H2B) 0.01 OrthoFinder output from all 47 species
Solyc11g066430.2.1 Solyc11g066430 histone (H2B) 0.01 OrthoFinder output from all 47 species
Solyc12g011455.1.1 HTB11, Solyc12g011455 histone (H2B) 0.01 OrthoFinder output from all 47 species
Solyc12g013510.1.1 HTB11, Solyc12g013510 histone (H2B) 0.01 OrthoFinder output from all 47 species
Spa_g01863 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g32990 HTB4 histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g50701 No alias histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g52508 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004028_P001 HTB11, Zm00001e004028 histone (H2B) 0.01 OrthoFinder output from all 47 species
Zm00001e009857_P001 HTB11, Zm00001e009857 histone (H2B) 0.01 OrthoFinder output from all 47 species
Zm00001e016882_P001 HTB2, H2B, Zm00001e016882 histone (H2B) 0.03 OrthoFinder output from all 47 species
Zm00001e019346_P001 HTB4, Zm00001e019346 histone (H2B) 0.02 OrthoFinder output from all 47 species
Zm00001e020484_P002 HTB1, Zm00001e020484 histone (H2B) 0.02 OrthoFinder output from all 47 species
Zm00001e022201_P001 HTB11, Zm00001e022201 histone (H2B) 0.01 OrthoFinder output from all 47 species
Zm00001e023342_P001 HTB4, Zm00001e023342 histone (H2B) 0.01 OrthoFinder output from all 47 species
Zm00001e027803_P001 HTB11, Zm00001e027803 histone (H2B) 0.01 OrthoFinder output from all 47 species
Zm00001e034226_P001 HTB11, Zm00001e034226 histone (H2B) 0.03 OrthoFinder output from all 47 species
Zm00001e038466_P001 HTB1, Zm00001e038466 histone (H2B) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 7 110
No external refs found!