AMTR_s00059p00072050 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.46

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.G-class RAB GTPase


Gene families : OG_01_0001137 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001137_tree ,
OG_02_0000971 (LandPlants) Phylogenetic Tree(s): OG_02_0000971_tree ,
OG_03_0000847 (SeedPlants) Phylogenetic Tree(s): OG_03_0000847_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00072050
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
AT1G52280 AtRABG3d, RABG3d RAB GTPase homolog G3D 0.06 Archaeplastida
LOC_Os01g12730.1 No alias G-class RAB GTPase 0.04 Archaeplastida
LOC_Os01g51700.1 No alias G-class RAB GTPase 0.02 Archaeplastida
Solyc01g109520.3.1 No alias G-class RAB GTPase 0.02 Archaeplastida
AT1G52280 AtRABG3d, RABG3d RAB GTPase homolog G3D 0.06 LandPlants
LOC_Os01g12730.1 No alias G-class RAB GTPase 0.04 LandPlants
LOC_Os01g51700.1 No alias G-class RAB GTPase 0.02 LandPlants
Solyc01g109520.3.1 No alias G-class RAB GTPase 0.02 LandPlants
AT1G52280 AtRABG3d, RABG3d RAB GTPase homolog G3D 0.06 SeedPlants
LOC_Os01g12730.1 No alias G-class RAB GTPase 0.04 SeedPlants
LOC_Os01g51700.1 No alias G-class RAB GTPase 0.02 SeedPlants
Solyc01g109520.3.1 No alias G-class RAB GTPase 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
BP GO:0007264 small GTPase mediated signal transduction IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001806 Small_GTPase 12 132
No external refs found!