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  5. Mp6g14500.1

Mp6g14500.1


Description : plastidial RNA processing factor (PPR287)


Gene families : OG_01_0008036 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008036_tree ,
OG_02_0007862 (LandPlants) Phylogenetic Tree(s): OG_02_0007862_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g14500.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AT3G59040 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.1 Archaeplastida
GSVIVT01020809001 No alias Pentatricopeptide repeat-containing protein At3g59040... 0.12 Archaeplastida
Gb_12237 No alias plastidial RNA processing factor (PPR287) 0.03 Archaeplastida
LOC_Os08g09270.1 No alias plastidial RNA processing factor (PPR287) 0.12 Archaeplastida
MA_10437236g0010 No alias plastidial RNA processing factor (PPR287) 0.07 Archaeplastida
Pp3c26_11100V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.13 Archaeplastida
Smo448320 No alias Pentatricopeptide repeat-containing protein At3g59040... 0.06 Archaeplastida
Solyc07g043600.4.1 No alias plastidial RNA processing factor (PPR287) 0.11 Archaeplastida
AT3G59040 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.09 LandPlants
GSVIVT01020809001 No alias Pentatricopeptide repeat-containing protein At3g59040... 0.12 LandPlants
Gb_12237 No alias plastidial RNA processing factor (PPR287) 0.03 LandPlants
LOC_Os08g09270.1 No alias plastidial RNA processing factor (PPR287) 0.12 LandPlants
MA_10437236g0010 No alias plastidial RNA processing factor (PPR287) 0.06 LandPlants
Pp3c26_11100V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.13 LandPlants
Smo448320 No alias Pentatricopeptide repeat-containing protein At3g59040... 0.05 LandPlants
Solyc07g043600.4.1 No alias plastidial RNA processing factor (PPR287) 0.11 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR033443 PPR_long 311 437
IPR002885 Pentatricopeptide_repeat 268 308
IPR002885 Pentatricopeptide_repeat 444 485
IPR002885 Pentatricopeptide_repeat 188 243
No external refs found!