Mp6g14500.1


Description : plastidial RNA processing factor (PPR287)


Gene families : OG_01_0008036 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008036_tree ,
OG_02_0007862 (LandPlants) Phylogenetic Tree(s): OG_02_0007862_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g14500.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AT3G59040 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.1 Archaeplastida
GSVIVT01020809001 No alias Pentatricopeptide repeat-containing protein At3g59040... 0.12 Archaeplastida
Gb_12237 No alias plastidial RNA processing factor (PPR287) 0.03 Archaeplastida
LOC_Os08g09270.1 No alias plastidial RNA processing factor (PPR287) 0.12 Archaeplastida
MA_10437236g0010 No alias plastidial RNA processing factor (PPR287) 0.07 Archaeplastida
Pp3c26_11100V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.13 Archaeplastida
Smo448320 No alias Pentatricopeptide repeat-containing protein At3g59040... 0.06 Archaeplastida
Solyc07g043600.4.1 No alias plastidial RNA processing factor (PPR287) 0.11 Archaeplastida
AT3G59040 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.09 LandPlants
GSVIVT01020809001 No alias Pentatricopeptide repeat-containing protein At3g59040... 0.12 LandPlants
Gb_12237 No alias plastidial RNA processing factor (PPR287) 0.03 LandPlants
LOC_Os08g09270.1 No alias plastidial RNA processing factor (PPR287) 0.12 LandPlants
MA_10437236g0010 No alias plastidial RNA processing factor (PPR287) 0.06 LandPlants
Pp3c26_11100V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.13 LandPlants
Smo448320 No alias Pentatricopeptide repeat-containing protein At3g59040... 0.05 LandPlants
Solyc07g043600.4.1 No alias plastidial RNA processing factor (PPR287) 0.11 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR033443 PPR_long 311 437
IPR002885 Pentatricopeptide_repeat 268 308
IPR002885 Pentatricopeptide_repeat 444 485
IPR002885 Pentatricopeptide_repeat 188 243
No external refs found!