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  5. Pp3c12_7610V3.1

Pp3c12_7610V3.1 (HTB4, Pp3c12_7610)


Aliases : HTB4, Pp3c12_7610

Description : Histone superfamily protein


Gene families : OG0000176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_7610V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00085300 HTB4,... Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
AMTR_s00012p00085960 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
AT1G07790 HTB1 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G45980 HTB9, H2B Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G46030 HTB11 Histone superfamily protein 0.08 OrthoFinder output from all 47 species
AT5G22880 HTB2, H2B histone B2 0.01 OrthoFinder output from all 47 species
AT5G59910 HTB4 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g004775 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019244 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021198 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021200 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g032961 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g068717 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086614 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102459 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05666 No alias histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene17102.t1 HTB4, Aspi01Gene17102 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17106.t1 HTB4, Aspi01Gene17106 histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene27518.t1 HTB4, Aspi01Gene27518 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0019.g015129 HTB4 histone *(H2B) & original description: CDS=1-441 0.04 OrthoFinder output from all 47 species
Ceric.03G007900.1 HTB4, Ceric.03G007900 histone *(H2B) & original description: pacid=50571513... 0.07 OrthoFinder output from all 47 species
Ceric.04G053600.1 HTB4, Ceric.04G053600 histone *(H2B) & original description: pacid=50631349... 0.04 OrthoFinder output from all 47 species
Ceric.06G011800.1 HTB4, Ceric.06G011800 histone *(H2B) & original description: pacid=50619795... 0.04 OrthoFinder output from all 47 species
Ceric.12G022100.1 HTB4, Ceric.12G022100 histone *(H2B) & original description: pacid=50601168... 0.02 OrthoFinder output from all 47 species
Ceric.12G022200.1 HTB4, Ceric.12G022200 histone *(H2B) & original description: pacid=50601405... 0.12 OrthoFinder output from all 47 species
Ceric.20G039500.1 HTB4, Ceric.20G039500 histone *(H2B) & original description: pacid=50566293... 0.14 OrthoFinder output from all 47 species
Ceric.20G076900.1 HTB4, Ceric.20G076900 histone *(H2B) & original description: pacid=50566872... 0.08 OrthoFinder output from all 47 species
Ceric.24G053000.1 HTB4, Ceric.24G053000 histone *(H2B) & original description: pacid=50628469... 0.2 OrthoFinder output from all 47 species
Ceric.24G053100.1 HTB4, Ceric.24G053100 histone *(H2B) & original description: pacid=50628870... 0.2 OrthoFinder output from all 47 species
Ceric.27G028800.1 HTB4, Ceric.27G028800 histone *(H2B) & original description: pacid=50605139... 0.17 OrthoFinder output from all 47 species
Ceric.27G029200.1 Ceric.27G029200 histone *(H2B) & original description: pacid=50606171... 0.07 OrthoFinder output from all 47 species
Ceric.29G085800.1 HTB4, Ceric.29G085800 histone *(H2B) & original description: pacid=50624560... 0.04 OrthoFinder output from all 47 species
Ceric.29G085900.1 HTB4, Ceric.29G085900 histone *(H2B) & original description: pacid=50624351... 0.11 OrthoFinder output from all 47 species
Cre06.g264800 HTB4 Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g264900 HTB4 Chromatin organisation.histones.H2B-type histone 0.07 OrthoFinder output from all 47 species
Cre06.g266750 HTB4 Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g271376 HTB4 Chromatin organisation.histones.H2B-type histone 0.2 OrthoFinder output from all 47 species
Cre06.g273850 HTB4 Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g274250 HTB4 Chromatin organisation.histones.H2B-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g275800 HTB4 Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g276550 HTB4 Chromatin organisation.histones.H2B-type histone 0.08 OrthoFinder output from all 47 species
Cre06.g276900 HTB4 Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from all 47 species
Cre12.g504550 HTB4 Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g504700 HTB4 Chromatin organisation.histones.H2B-type histone 0.07 OrthoFinder output from all 47 species
Cre12.g505600 HTB4 Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from all 47 species
Cre12.g506200 HTB4 Chromatin organisation.histones.H2B-type histone 0.07 OrthoFinder output from all 47 species
Cre13.g570050 HTB4 Chromatin organisation.histones.H2B-type histone 0.08 OrthoFinder output from all 47 species
Cre17.g709150 HTB4 Chromatin organisation.histones.H2B-type histone 0.07 OrthoFinder output from all 47 species
Cre17.g710450 HTB4 Chromatin organisation.histones.H2B-type histone 0.08 OrthoFinder output from all 47 species
Cre17.g711750 HTB4 Chromatin organisation.histones.H2B-type histone 0.07 OrthoFinder output from all 47 species
Cre17.g714050 HTB4 Chromatin organisation.histones.H2B-type histone 0.06 OrthoFinder output from all 47 species
Dac_g17045 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_02245 HTB11 histone (H2B) 0.12 OrthoFinder output from all 47 species
Gb_12082 No alias histone (H2B) 0.04 OrthoFinder output from all 47 species
Gb_12096 No alias histone (H2B) 0.02 OrthoFinder output from all 47 species
Gb_26315 HTB11 histone (H2B) 0.07 OrthoFinder output from all 47 species
Gb_32754 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
Gb_41508 HTB4 histone (H2B) 0.07 OrthoFinder output from all 47 species
LOC_Os01g05610.1 HTB11, LOC_Os01g05610 histone (H2B) 0.01 OrthoFinder output from all 47 species
LOC_Os01g05900.1 HTB11, LOC_Os01g05900 histone (H2B) 0.04 OrthoFinder output from all 47 species
LOC_Os01g05970.1 HTB11, LOC_Os01g05970 histone (H2B) 0.02 OrthoFinder output from all 47 species
LOC_Os01g06010.1 HTB11, LOC_Os01g06010 histone (H2B) 0.02 OrthoFinder output from all 47 species
LOC_Os01g62230.1 LOC_Os01g62230 histone (H2B) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49860.1 HTB11, LOC_Os05g49860 histone (H2B) 0.09 OrthoFinder output from all 47 species
LOC_Os08g38300.1 HTB11, LOC_Os08g38300 histone (H2B) 0.05 OrthoFinder output from all 47 species
MA_10151143g0010 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
MA_10428006g0010 HTB11 histone (H2B) 0.17 OrthoFinder output from all 47 species
MA_10435143g0010 No alias histone (H2B) 0.08 OrthoFinder output from all 47 species
MA_10436516g0010 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
MA_10436516g0020 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
MA_10436516g0030 HTB11 histone (H2B) 0.01 OrthoFinder output from all 47 species
MA_38565g0010 No alias histone (H2B) 0.03 OrthoFinder output from all 47 species
MA_6078786g0010 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
MA_77198g0010 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
MA_8065g0010 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
MA_9293473g0010 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
Mp4g13450.1 HTB11 histone (H2B) 0.02 OrthoFinder output from all 47 species
Mp6g04070.1 No alias histone (H2B) 0.25 OrthoFinder output from all 47 species
Mp6g07010.1 HTB4 histone (H2B) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017109 No alias histone *(H2B) & original description: CDS=1-441 0.01 OrthoFinder output from all 47 species
Sam_g37867 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Smo182308 HTB4 Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Solyc02g038690.1.1 HTB4, Solyc02g038690 histone (H2B) 0.06 OrthoFinder output from all 47 species
Solyc03g071620.2.1 Solyc03g071620 histone (H2B) 0.06 OrthoFinder output from all 47 species
Solyc05g055440.1.1 HTB11, Solyc05g055440 histone (H2B) 0.08 OrthoFinder output from all 47 species
Solyc06g074780.1.1 HTB4, Solyc06g074780 histone (H2B) 0.09 OrthoFinder output from all 47 species
Solyc06g074790.2.1 HTB11, Solyc06g074790 histone (H2B) 0.07 OrthoFinder output from all 47 species
Solyc06g075800.1.1 HTB11, Solyc06g075800 histone (H2B) 0.03 OrthoFinder output from all 47 species
Solyc11g007920.1.1 HTB11, Solyc11g007920 histone (H2B) 0.05 OrthoFinder output from all 47 species
Solyc11g007930.1.1 HTB11, Solyc11g007930 histone (H2B) 0.06 OrthoFinder output from all 47 species
Solyc11g066430.2.1 Solyc11g066430 histone (H2B) 0.07 OrthoFinder output from all 47 species
Spa_g01863 No alias histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32990 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39909 HTB4 histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g45813 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50701 No alias histone *(H2B) & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g52508 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05754 No alias histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g09273 No alias histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e004028_P001 HTB11, Zm00001e004028 histone (H2B) 0.04 OrthoFinder output from all 47 species
Zm00001e009857_P001 HTB11, Zm00001e009857 histone (H2B) 0.06 OrthoFinder output from all 47 species
Zm00001e016882_P001 HTB2, H2B, Zm00001e016882 histone (H2B) 0.07 OrthoFinder output from all 47 species
Zm00001e019346_P001 HTB4, Zm00001e019346 histone (H2B) 0.06 OrthoFinder output from all 47 species
Zm00001e020484_P002 HTB1, Zm00001e020484 histone (H2B) 0.05 OrthoFinder output from all 47 species
Zm00001e022201_P001 HTB11, Zm00001e022201 histone (H2B) 0.03 OrthoFinder output from all 47 species
Zm00001e023342_P001 HTB4, Zm00001e023342 histone (H2B) 0.09 OrthoFinder output from all 47 species
Zm00001e027803_P001 HTB11, Zm00001e027803 histone (H2B) 0.06 OrthoFinder output from all 47 species
Zm00001e034226_P001 HTB11, Zm00001e034226 histone (H2B) 0.07 OrthoFinder output from all 47 species
Zm00001e038466_P001 HTB1, Zm00001e038466 histone (H2B) 0.17 OrthoFinder output from all 47 species
Zm00001e039057_P002 HTB11, Zm00001e039057 histone (H2B) 0.02 OrthoFinder output from all 47 species
Zm00001e041296_P001 HTB11, Zm00001e041296 histone (H2B) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 7 111
No external refs found!