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  5. Pp3c12_6548V3.1

Pp3c12_6548V3.1 (TCH3, ATCAL4, Pp3c12_6548)


Aliases : TCH3, ATCAL4, Pp3c12_6548

Description : EF hand calcium-binding protein family


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_6548V3.1

Target Alias Description ECC score Gene Family Method Actions
Als_g02957 CML41 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27911 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g10925 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10805 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g22368 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
MA_194997g0010 No alias no description available(sp|a0t2m3|polc4_hesar : 130.0) 0.02 OrthoFinder output from all 47 species
Msp_g20815 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Smo91501 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Spa_g40909 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 32 60
IPR002048 EF_hand_dom 115 179
No external refs found!