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  5. Pp3c12_19190V3.1

Pp3c12_19190V3.1 (LHCA2, Pp3c12_19190)


Aliases : LHCA2, Pp3c12_19190

Description : photosystem I light harvesting complex gene 2


Gene families : OG0000742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000742_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_19190V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00180670 LHCA2,... Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 OrthoFinder output from all 47 species
AMTR_s00131p00114510 evm_27.TU.AmTr_v1... Photosystem I chlorophyll a/b-binding protein 6,... 0.02 OrthoFinder output from all 47 species
Aop_g21835 CAB4, LHCA4 component *(LHCa4) of LHC-I complex & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44141.t1 LHCA2, Aspi01Gene44141 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15852 LHCA2 component *(LHCa2) of LHC-I complex & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g36933 LHCA2 component *(LHCa2) of LHC-I complex & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g13923 LHCA5 linker protein *(LHCa5) between PS-I complex and NDH... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 75 225
No external refs found!