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  5. Pp3c12_16950V3.1

Pp3c12_16950V3.1 (Pp3c12_16950)


Aliases : Pp3c12_16950

Description : Transducin family protein / WD-40 repeat family protein


Gene families : OG0004386 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004386_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_16950V3.1

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0043.g026948 No alias substrate adaptor *(HTD1/DWD1) of CUL4-based E3... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001493.9 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre17.g724850 No alias WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc07g039200.4.1 Solyc07g039200 WD-40 repeat-containing protein MSI2 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR022052 Histone-bd_RBBP4_N 58 125
IPR001680 WD40_repeat 331 364
IPR001680 WD40_repeat 286 320
No external refs found!