LOC_Os04g57860 (Os04g0674800)


Aliases : Os04g0674800

Description : 26.3.4 misc.gluco-, galacto- and mannosidases.endoglucanase glycosyl hydrolase 9C1 (GH9C1)


Gene families : OG_01_0000062 (Gene family) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g57860
Cluster HCCA cluster: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AT1G19940 AtGH9B5, GH9B5 glycosyl hydrolase 9B5 0.02 Gene family
AT1G22880 CEL5, ATGH9B4, ATCEL5 cellulase 5 0.03 Gene family
AT1G23210 AtGH9B6, GH9B6 glycosyl hydrolase 9B6 0.02 Gene family
AT1G64390 GH9C2, AtGH9C2 glycosyl hydrolase 9C2 0.03 Gene family
AT1G71380 ATGH9B3, CEL3, ATCEL3 cellulase 3 0.03 Gene family
AT2G32990 AtGH9B8, GH9B8 glycosyl hydrolase 9B8 0.02 Gene family
AT2G44540 AtGH9B9, GH9B9 glycosyl hydrolase 9B9 0.03 Gene family
AT2G44550 GH9B10, AtGH9B10 glycosyl hydrolase 9B10 0.02 Gene family
AT2G44560 GH9B11, AtGH9B11 glycosyl hydrolase 9B11 0.03 Gene family
AT3G43860 AtGH9A4, GH9A4 glycosyl hydrolase 9A4 0.05 Gene family
AT4G02290 AtGH9B13, GH9B13 glycosyl hydrolase 9B13 0.02 Gene family
Cre06.g270500 No alias 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
GSVIVT01012043001 No alias 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
GSVIVT01018619001 No alias 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
GSVIVT01019420001 No alias 10.6.1 cell wall.degradation.cellulases and beta... 0.02 Gene family
GSVIVT01032798001 No alias 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
GSVIVT01037210001 No alias 10.6.1 cell wall.degradation.cellulases and beta... 0.03 Gene family
GSVIVT01037709001 No alias 10.6.1 cell wall.degradation.cellulases and beta... 0.03 Gene family
LOC_Os02g50490 Os02g0738600 10.6.1 cell wall.degradation.cellulases and beta... 0.02 Gene family
LOC_Os04g36610 Os04g0443300 26.3.4 misc.gluco-, galacto- and... 0.03 Gene family
LOC_Os05g12150 Os05g0212300 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
LOC_Os06g13830 Os06g0247900 10.6.1 cell wall.degradation.cellulases and beta... 0.03 Gene family
LOC_Os08g02220 Os08g0114200 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
LOC_Os09g36350 Os09g0533900 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
MA_10241783g0010 No alias 26.3.4 misc.gluco-, galacto- and... 0.03 Gene family
MA_140507g0010 No alias 26.3.4 misc.gluco-, galacto- and... 0.03 Gene family
MA_20530g0010 No alias 26.3.4 misc.gluco-, galacto- and... 0.01 Gene family
MA_216572g0010 No alias 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
MA_350239g0010 No alias 26.3.4 misc.gluco-, galacto- and... 0.01 Gene family
MA_480961g0010 No alias 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
Smo144066 PACid_15415509 No description available 0.02 Gene family
Smo234652 PACid_15404650 No description available 0.03 Gene family
Smo75214 PACid_15411249 No description available 0.04 Gene family
Smo77612 PACid_15420098 No description available 0.02 Gene family
Solyc02g014220.3.1 Solyc02g014220.3 26.3.4 misc.gluco-, galacto- and... 0.1 Gene family
Solyc04g081300.3.1 Solyc04g081300.3 10.6.1 cell wall.degradation.cellulases and beta... 0.02 Gene family
Solyc05g052530.2.1 Solyc05g052530.2 26.3.4 misc.gluco-, galacto- and... 0.01 Gene family
Solyc06g066120.3.1 Solyc06g066120.3 10.6.1 cell wall.degradation.cellulases and beta... 0.02 Gene family
Solyc07g064870.3.1 Solyc07g064870.3 10.6.1 cell wall.degradation.cellulases and beta... 0.01 Gene family
Solyc08g081620.3.1 Solyc08g081620.3 10.6.1 cell wall.degradation.cellulases and beta... 0.01 Gene family
Solyc08g083210.3.1 Solyc08g083210.3 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
Solyc09g010210.3.1 Solyc09g010210.3 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
Solyc12g055970.2.1 Solyc12g055970.2 26.3.4 misc.gluco-, galacto- and... 0.01 Gene family
Zm00001d009097 GRMZM2G331566 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
Zm00001d014782 GRMZM2G153987 26.3.4 misc.gluco-, galacto- and... 0.03 Gene family
Zm00001d015067 GRMZM2G141911 26.3.4 misc.gluco-, galacto- and... 0.05 Gene family
Zm00001d017949 GRMZM2G076049 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
Zm00001d017978 GRMZM2G151257 10.6.1 cell wall.degradation.cellulases and beta... 0.05 Gene family
Zm00001d020371 GRMZM2G451965 10.6.1 cell wall.degradation.cellulases and beta... 0.02 Gene family
Zm00001d025475 GRMZM2G125436 26.3.4 misc.gluco-, galacto- and... 0.04 Gene family
Zm00001d026605 GRMZM2G343144 26.3.4 misc.gluco-, galacto- and... 0.26 Gene family
Zm00001d037338 GRMZM2G455642 26.3.4 misc.gluco-, galacto- and... 0.02 Gene family
Zm00001d044744 GRMZM2G154678 10.6.1 cell wall.degradation.cellulases and beta... 0.04 Gene family
Zm00001d051814 GRMZM2G125991 10.6.1 cell wall.degradation.cellulases and beta... 0.07 Gene family

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 39 500
IPR019028 CBM_49 532 610
No external refs found!