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  5. Pp3c12_11370V3.1

Pp3c12_11370V3.1 (Pp3c12_11370)


Aliases : Pp3c12_11370

Description : AAA-type ATPase family protein


Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_11370V3.1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene27195.t1 emb1354, CDC48C,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27196.t1 emb1354, CDC48C,... platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10573 No alias platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Cre06.g269950 No alias Cell division control protein 48 homolog E... 0.01 OrthoFinder output from all 47 species
Dac_g32334 CIP111 platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39574 CDC48B platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g43329 CDC48B platform ATPase CDC48 & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g10879 No alias platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10495 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pp3c7_25950V3.1 CDC48A, CDC48,... ATPase, AAA-type, CDC48 protein 0.01 OrthoFinder output from all 47 species
Spa_g22537 No alias platform ATPase CDC48 & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!