Pp3c11_3090V3.1 (RPL34, Pp3c11_3090)

Aliases : RPL34, Pp3c11_3090

Description : Ribosomal protein L34e superfamily protein

Gene families : OG0000940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000940_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c11_3090V3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00260490	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
AMTR_s00010p00260730	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
AT1G26880	No alias	Ribosomal protein L34e superfamily protein	0.05	OrthoFinder output from all 47 species
AT1G69620	RPL34	ribosomal protein L34	0.04	OrthoFinder output from all 47 species
AT3G28900	No alias	Ribosomal protein L34e superfamily protein	0.05	OrthoFinder output from all 47 species
Adi_g023873	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ala_g19937	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g19797	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Aspi01Gene60347.t1	Aspi01Gene60347	component *(eL34) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Azfi_s0094.g043410	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Azfi_s0225.g058934	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ceric.29G078700.1	Ceric.29G078700	component *(eL34) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Ceric.34G068800.1	Ceric.34G068800	component *(eL34) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000632.3	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Cre16.g661050	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.07	OrthoFinder output from all 47 species
Dac_g02443	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g20175	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g28753	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g41529	RPL34	component *(eL34) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
GSVIVT01019985001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.07	OrthoFinder output from all 47 species
Gb_36060	No alias	component RPL34 of LSU proteome component	0.02	OrthoFinder output from all 47 species
LOC_Os08g06040.1	LOC_Os08g06040	component RPL34 of LSU proteome component	0.04	OrthoFinder output from all 47 species
LOC_Os08g33920.1	LOC_Os08g33920	component RPL34 of LSU proteome component	0.03	OrthoFinder output from all 47 species
LOC_Os09g24690.1	LOC_Os09g24690	component RPL34 of LSU proteome component	0.02	OrthoFinder output from all 47 species
MA_109553g0010	No alias	component RPL34 of LSU proteome component	0.03	OrthoFinder output from all 47 species
MA_175574g0010	No alias	component RPL34 of LSU proteome component	0.02	OrthoFinder output from all 47 species
MA_7581523g0010	No alias	component RPL34 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Mp4g17040.1	No alias	component RPL34 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Msp_g33299	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Ppi_g22544	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Ppi_g28189	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Ppi_g58066	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Sam_g05824	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g22792	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Sam_g46511	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Smo113433	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Solyc02g087930.3.1	Solyc02g087930	component RPL34 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Solyc05g007560.3.1	Solyc05g007560	component RPL34 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Solyc06g069860.4.1	Solyc06g069860	component RPL34 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Spa_g28558	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Zm00001e004116_P001	Zm00001e004116	component RPL34 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Zm00001e021733_P002	Zm00001e021733	component RPL34 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Zm00001e034114_P001	Zm00001e034114	component RPL34 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Zm00001e040229_P001	Zm00001e040229	component RPL34 of LSU proteome component	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004129	cytochrome-c oxidase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
CC	GO:0005743	mitochondrial inner membrane	IEP	HCCA
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	HCCA
CC	GO:0005751	mitochondrial respiratory chain complex IV	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009060	aerobic respiration	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	IEP	HCCA
BP	GO:0019646	aerobic electron transport chain	IEP	HCCA
CC	GO:0019866	organelle inner membrane	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0022904	respiratory electron transport chain	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0043248	proteasome assembly	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
CC	GO:0045275	respiratory chain complex III	IEP	HCCA
CC	GO:0045277	respiratory chain complex IV	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
CC	GO:0098803	respiratory chain complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1902495	transmembrane transporter complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA
CC	GO:1990351	transporter complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008195	Ribosomal_L34Ae	1	96

External Links

No external refs found!

Pp3c11_3090V3.1 (RPL34, Pp3c11_3090)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation