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  5. Pp3c11_300V3.1

Pp3c11_300V3.1 (Pp3c11_300)


Aliases : Pp3c11_300

Description : CCCH-type zinc finger family protein


Gene families : OG0011440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_300V3.1

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_430V3.1 Pp3c11_430 Protein kinase family protein 0.02 OrthoFinder output from all 47 species
Pp3c13_30V3.1 Pp3c13_30 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c15_40V3.1 Pp3c15_40 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c19_23020V3.1 Pp3c19_23020 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c19_40V3.1 Pp3c19_40 CCCH-type zinc finger family protein 0.02 OrthoFinder output from all 47 species
Pp3c19_427V3.1 Pp3c19_427 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c23_220V3.1 Pp3c23_220 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 OrthoFinder output from all 47 species
Pp3c2_38360V3.1 Pp3c2_38360 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c5_29008V3.1 Pp3c5_29008 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 OrthoFinder output from all 47 species
Pp3c5_29184V3.1 Pp3c5_29184 No annotation 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006313 transposition, DNA-mediated IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0032196 transposition IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!