Pp3c11_24910V3.1 (ATDRH1, DRH1, Pp3c11_24910)

Aliases : ATDRH1, DRH1, Pp3c11_24910

Description : DEAD box RNA helicase 1

Gene families : OG0000636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000636_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c11_24910V3.1

Target	Alias	Description	ECC score	Gene Family Method
Ala_g09574	ATDRH1, DRH1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g12501	ATDRH1, DRH1	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dde_g17414	ATDRH1, DRH1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g14167	ATDRH1, DRH1	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g57963	No alias	regulatory RNA helicase *(RH20/RH30) of virus...	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017597	ATDRH1, DRH1	not classified & original description: CDS=159-3038	0.01	OrthoFinder output from all 47 species
Spa_g57014	ATDRH1, DRH1	not classified & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	437	545
IPR011545	DEAD/DEAH_box_helicase_dom	230	400
IPR001202	WW_dom	19	49

External Links

No external refs found!