Pp3c11_22180V3.1 (Pp3c11_22180)


Aliases : Pp3c11_22180

Description : disease resistance protein (TIR-NBS-LRR class)


Gene families : OG0020397 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0020397_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_22180V3.1

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_7670V3.1 Pp3c10_7670 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c14_23670V3.1 Pp3c14_23670 No annotation 0.04 OrthoFinder output from all 47 species
Pp3c20_2230V3.1 Pp3c20_2230 No annotation 0.04 OrthoFinder output from all 47 species
Pp3c9_24920V3.1 Pp3c9_24920 Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!