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  5. Pp3c11_22180V3.1

Pp3c11_22180V3.1 (Pp3c11_22180)


Aliases : Pp3c11_22180

Description : disease resistance protein (TIR-NBS-LRR class)


Gene families : OG0020397 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0020397_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_22180V3.1

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_7670V3.1 Pp3c10_7670 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c14_23670V3.1 Pp3c14_23670 No annotation 0.04 OrthoFinder output from all 47 species
Pp3c20_2230V3.1 Pp3c20_2230 No annotation 0.04 OrthoFinder output from all 47 species
Pp3c9_24920V3.1 Pp3c9_24920 Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!