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  5. Pp3c11_22160V3.1

Pp3c11_22160V3.1 (Pp3c11_22160)


Aliases : Pp3c11_22160

Description : ATP-dependent RNA helicase, putative


Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_22160V3.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g37436 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g38553 EMB3011 RNA helicase *(Prp16) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene46881.t1 ESP3, EMB2733,... RNA helicase *(Prp2) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04257 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021589.29 No alias Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.01 OrthoFinder output from all 47 species
Lfl_g05720 EMB3011 RNA helicase *(Prp16) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g04229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 15 82
No external refs found!