1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c11_22150V3.1

Pp3c11_22150V3.1 (Pp3c11_22150)


Aliases : Pp3c11_22150

Description : 3-ketoacyl-CoA synthase 11


Gene families : OG0000066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_22150V3.1
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00182480 KCS4,... Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 OrthoFinder output from all 47 species
AT1G01120 KCS1 3-ketoacyl-CoA synthase 1 0.01 OrthoFinder output from all 47 species
AT1G68530 G2, POP1, KCS6,... 3-ketoacyl-CoA synthase 6 0.02 OrthoFinder output from all 47 species
AT2G16280 KCS9 3-ketoacyl-CoA synthase 9 0.01 OrthoFinder output from all 47 species
Adi_g037704 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g05041 KCS11 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05416 KCS20 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g10992 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g35132 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08992 KCS11 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene30027.t1 KCS1, Aspi01Gene30027 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene35898.t1 KCS11, Aspi01Gene35898 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40237.t1 KCS1, Aspi01Gene40237 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65238.t1 KCS1, Aspi01Gene65238 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67076.t1 KCS1, Aspi01Gene67076 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0006.g009870 KCS9 3-ketoacyl-CoA synthase *(KCS) & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0082.g038730 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1383 0.01 OrthoFinder output from all 47 species
Azfi_s0132.g049256 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1740 0.03 OrthoFinder output from all 47 species
Azfi_s0132.g049270 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1533 0.02 OrthoFinder output from all 47 species
Azfi_s0711.g083016 KCS5, CER60 3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-708 0.03 OrthoFinder output from all 47 species
Ceric.13G063100.1 KCS1, Ceric.13G063100 3-ketoacyl-CoA synthase *(KCS) & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.39G044200.1 KCS4, Ceric.39G044200 3-ketoacyl-CoA synthase *(KCS) & original description:... 0.01 OrthoFinder output from all 47 species
Dac_g27642 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g02791 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07027 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g22693 KCS10, FDH 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.01 OrthoFinder output from all 47 species
Gb_06884 KCS4 3-ketoacyl-CoA synthase (KCS) 0.01 OrthoFinder output from all 47 species
Gb_20857 No alias 3-ketoacyl-CoA synthase (KCS) 0.01 OrthoFinder output from all 47 species
Gb_27863 KCS9 3-ketoacyl-CoA synthase (KCS) 0.01 OrthoFinder output from all 47 species
LOC_Os03g14170.1 KCS1, LOC_Os03g14170 3-ketoacyl-CoA synthase (KCS) 0.01 OrthoFinder output from all 47 species
MA_10426106g0010 KCS4 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
MA_10426663g0020 KCS1 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
MA_10605g0020 G2, POP1, KCS6,... 3-ketoacyl-CoA synthase (KCS) 0.01 OrthoFinder output from all 47 species
MA_43136g0010 KCS4 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
MA_45157g0010 KCS1 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
MA_56709g0010 KCS4 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
Msp_g16034 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07810 KCS9 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10769 HIC, KCS13 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g12875 G2, POP1, KCS6,... 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g11819 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g13963 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015376 G2, POP1, KCS6,... 3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1761 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017599 HIC, KCS13 3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1467 0.01 OrthoFinder output from all 47 species
Solyc12g006820.1.1 KCS11, Solyc12g006820 3-ketoacyl-CoA synthase (KCS) 0.01 OrthoFinder output from all 47 species
Spa_g07018 KCS11 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g13099 KCS9 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g30594 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g31045 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00845 KCS1 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g04520 KCS4 3-ketoacyl-CoA synthase *(KCS) & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e002667_P002 KCS1, Zm00001e002667 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
Zm00001e030953_P001 G2, POP1, KCS6,... 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
Zm00001e033922_P001 KCS17, Zm00001e033922 3-ketoacyl-CoA synthase (KCS) 0.02 OrthoFinder output from all 47 species
Zm00001e038699_P001 G2, POP1, KCS6,... 3-ketoacyl-CoA synthase (KCS) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006810 transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!