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  5. Pp3c11_15740V3.1

Pp3c11_15740V3.1 (Pp3c11_15740)


Aliases : Pp3c11_15740

Description : nuclear RNA polymerase A1


Gene families : OG0011134 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_15740V3.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Pp3c6_15700V3.1 Pp3c6_15700 nuclear RNA polymerase C1 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0046930 pore complex IEP HCCA
BP GO:0046931 pore complex assembly IEP HCCA
BP GO:0052331 obsolete hemolysis in other organism involved in symbiotic interaction IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR007081 RNA_pol_Rpb1_5 87 130
No external refs found!