Pp3c10_5250V3.1 (PAC1, Pp3c10_5250)

Aliases : PAC1, Pp3c10_5250

Description : 20S proteasome alpha subunit C1

Gene families : OG0004222 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004222_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c10_5250V3.1
Cluster	HCCA: Cluster_67

Target	Alias	Description	ECC score	Gene Family Method
Aob_g04009	PAC1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene70834.t1	PAC1, Aspi01Gene70834	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
LOC_Os06g07878.1	PAC1, LOC_Os06g07878	component alpha type-3 of 26S proteasome	0.01	OrthoFinder output from all 47 species
LOC_Os06g07978.1	PAC1, LOC_Os06g07978	component alpha type-3 of 26S proteasome	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004298	threonine-type endopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	IEA	Interproscan
MF	GO:0070003	threonine-type peptidase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	25	141

External Links

No external refs found!