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  5. LOC_Os04g55520

LOC_Os04g55520 (Os04g0648900)


Aliases : Os04g0648900

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g55520
Cluster HCCA cluster: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G43160 RAP2.6 related to AP2 6 0.03 Gene family
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G74930 ORA47 Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT2G33710 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.03 Gene family
AT3G16770 ERF72, EBP, ATEBP, RAP2.3 ethylene-responsive element binding protein 0.03 Gene family
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.02 Gene family
AT4G34410 RRTF1 redox responsive transcription factor 1 0.03 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G21960 No alias Integrase-type DNA-binding superfamily protein 0.06 Gene family
AT5G50080 ERF110 ethylene response factor 110 0.02 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G67190 DEAR2 DREB and EAR motif protein 2 0.02 Gene family
Cre16.g674890 No alias No description available 0.02 Gene family
GSVIVT01013905001 No alias No description available 0.04 Gene family
GSVIVT01013913001 No alias No description available 0.04 Gene family
GSVIVT01013914001 No alias No description available 0.03 Gene family
GSVIVT01013916001 No alias No description available 0.06 Gene family
GSVIVT01013917001 No alias No description available 0.04 Gene family
GSVIVT01013918001 No alias No description available 0.05 Gene family
GSVIVT01013923001 No alias No description available 0.03 Gene family
GSVIVT01013929001 No alias No description available 0.05 Gene family
GSVIVT01015037001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
GSVIVT01018271001 No alias No description available 0.02 Gene family
GSVIVT01019519001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
GSVIVT01020584001 No alias No description available 0.03 Gene family
GSVIVT01021146001 No alias No description available 0.03 Gene family
GSVIVT01022277001 No alias No description available 0.03 Gene family
GSVIVT01028314001 No alias No description available 0.02 Gene family
GSVIVT01028315001 No alias No description available 0.02 Gene family
GSVIVT01031747001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
GSVIVT01032983001 No alias No description available 0.02 Gene family
GSVIVT01034563001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
GSVIVT01035502001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
LOC_Os01g10370 Os01g0200600 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os01g21120 Os01g0313300 No description available 0.02 Gene family
LOC_Os02g34260 Os02g0546600 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.03 Gene family
LOC_Os02g54050 Os02g0781300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os03g08460 Os03g0182800 No description available 0.03 Gene family
LOC_Os04g57340 Os04g0669200 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os05g39590 Os05g0473300 No description available 0.02 Gene family
LOC_Os05g41760 Os05g0497200 No description available 0.02 Gene family
LOC_Os08g35240 Os08g0454000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os08g36920 Os08g0474000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os08g44960 No alias 17.5.3 hormone... 0.02 Gene family
LOC_Os10g25170 Os10g0390800 No description available 0.02 Gene family
MA_10031781g0010 No alias No description available 0.02 Gene family
MA_10266433g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
MA_116185g0010 No alias No description available 0.02 Gene family
MA_225124g0010 No alias No description available 0.03 Gene family
MA_66742g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_8984558g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_97319g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc01g057080.1.1 Solyc01g057080.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc01g090560.3.1 Solyc01g090560.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc01g108240.3.1 Solyc01g108240.3 No description available 0.02 Gene family
Solyc02g077370.1.1 Solyc02g077370.1 No description available 0.03 Gene family
Solyc02g090800.1.1 Solyc02g090800.1 No description available 0.05 Gene family
Solyc03g093560.1.1 Solyc03g093560.1 No description available 0.02 Gene family
Solyc03g093610.1.1 Solyc03g093610.1 No description available 0.02 Gene family
Solyc04g007170.3.1 Solyc04g007170.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Solyc04g012050.3.1 Solyc04g012050.3 No description available 0.07 Gene family
Solyc04g014530.1.1 Solyc04g014530.1 No description available 0.02 Gene family
Solyc04g051360.3.1 Solyc04g051360.3 No description available 0.03 Gene family
Solyc04g080910.1.1 Solyc04g080910.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc05g052050.1.1 Solyc05g052050.1 No description available 0.05 Gene family
Solyc06g065820.3.1 Solyc06g065820.3 No description available 0.02 Gene family
Solyc06g068830.2.1 Solyc06g068830.2 No description available 0.04 Gene family
Solyc06g082590.1.1 Solyc06g082590.1 No description available 0.03 Gene family
Solyc07g053740.1.1 Solyc07g053740.1 No description available 0.03 Gene family
Solyc08g078180.1.1 Solyc08g078180.1 No description available 0.02 Gene family
Solyc08g078190.1.1 Solyc08g078190.1 No description available 0.03 Gene family
Solyc09g075420.3.1 Solyc09g075420.3 No description available 0.02 Gene family
Solyc09g089930.2.1 Solyc09g089930.2 No description available 0.03 Gene family
Solyc10g006130.1.1 Solyc10g006130.1 No description available 0.02 Gene family
Solyc10g050960.2.1 Solyc10g050960.2 No description available 0.02 Gene family
Solyc10g050970.1.1 Solyc10g050970.1 No description available 0.02 Gene family
Solyc11g042560.1.1 Solyc11g042560.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc12g042210.2.1 Solyc12g042210.2 No description available 0.03 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d002079 GRMZM2G174917 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d002364 GRMZM2G068967 No description available 0.03 Gene family
Zm00001d002762 GRMZM2G055180 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
Zm00001d005892 GRMZM2G138396 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d012585 GRMZM2G132185 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d014113 GRMZM2G024871 17.5.3 hormone... 0.03 Gene family
Zm00001d019734 GRMZM2G123119 No description available 0.06 Gene family
Zm00001d024324 GRMZM2G020054 No description available 0.03 Gene family
Zm00001d026191 GRMZM2G080516 No description available 0.05 Gene family
Zm00001d026563 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d027925 GRMZM2G018984 No description available 0.03 Gene family
Zm00001d027929 No alias No description available 0.03 Gene family
Zm00001d029940 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d038216 GRMZM2G481668 No description available 0.03 Gene family
Zm00001d038585 GRMZM2G020150 No description available 0.04 Gene family
Zm00001d042593 GRMZM2G307152 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d042717 GRMZM2G149756 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d043204 GRMZM2G002119 No description available 0.02 Gene family
Zm00001d043205 GRMZM2G310368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d048208 GRMZM2G113060 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d049058 GRMZM2G073258,... No description available 0.04 Gene family
Zm00001d049364 GRMZM2G089995 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d052167 GRMZM2G173771 No description available 0.05 Gene family
Zm00001d052229 GRMZM2G029323 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d053195 GRMZM2G076896 No description available 0.04 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 61 110
No external refs found!