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  5. Pp3c10_20740V3.1

Pp3c10_20740V3.1 (ARFA1E, ATARFA1E, Pp3c10_20740)


Aliases : ARFA1E, ATARFA1E, Pp3c10_20740

Description : ADP-ribosylation factor A1E


Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_20740V3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G10630 ATARFA1F, ARFA1F ADP-ribosylation factor A1F 0.02 OrthoFinder output from all 47 species
AT1G70490 ARFA1D, ATARFA1D Ras-related small GTP-binding family protein 0.03 OrthoFinder output from all 47 species
Adi_g009716 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g024167 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g051592 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g098748 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g110620 ATARFA1F, ARFA1F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08438 ARFA1E, ATARFA1E not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g12669 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57871 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g69136 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.129 ARFA1E, ATARFA1E Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Dac_g25617 ARFA1E, ATARFA1E not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g08383 ATARFA1F, ARFA1F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02001 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g09805 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09806 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g30050 No alias ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g07364 ARF1A1C ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g02390.1 ATARFB1B,... ARF-GTPase 0.01 OrthoFinder output from all 47 species
Lfl_g33269 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
MA_24477g0010 ATARFA1F, ARFA1F ARF-GTPase 0.01 OrthoFinder output from all 47 species
MA_4349g0020 ATARFA1F, ARFA1F ARF-GTPase 0.01 OrthoFinder output from all 47 species
Mp8g07320.1 ATARFB1C, ARFB1C ARF-GTPase 0.03 OrthoFinder output from all 47 species
Pir_g02141 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g43193 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000285 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: CDS=1-882 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020267 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: CDS=156-554 0.01 OrthoFinder output from all 47 species
Sam_g01985 No alias ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Smo140818 ATARFA1B, ARFA1B Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Spa_g16801 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g51173 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g03151 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e009391_P001 ARF1A1C, Zm00001e009391 ARF-GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e011790_P001 ATARFA1B,... ARF-GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e036138_P002 ATARFB1B,... ARF-GTPase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 5 177
No external refs found!