Description : protein factor PRPF6/PRP1/STA1 of U5 small nuclear ribonucleoprotein particle (snRNP)
Gene families : OG_01_0003244 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003244_tree ,
OG_02_0003710 (LandPlants) Phylogenetic Tree(s): OG_02_0003710_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Mp6g10790.1 | |
Cluster | HCCA: Cluster_60 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G03430 | STA1, EMB2770 | pre-mRNA splicing factor-related | 0.03 | Archaeplastida | |
Cpa|evm.model.tig00000880.19 | No alias | Protein STABILIZED1 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
Cre14.g633650 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.06 | Archaeplastida | |
GSVIVT01030385001 | No alias | Protein STABILIZED1 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
Gb_02940 | No alias | protein factor PRPF6/PRP1/STA1 of U5 small nuclear... | 0.03 | Archaeplastida | |
LOC_Os10g35550.1 | No alias | protein factor PRPF6/PRP1/STA1 of U5 small nuclear... | 0.01 | Archaeplastida | |
MA_18853g0010 | No alias | protein factor PRPF6/PRP1/STA1 of U5 small nuclear... | 0.02 | Archaeplastida | |
Pp3c24_11640V3.1 | No alias | pre-mRNA splicing factor-related | 0.04 | Archaeplastida | |
Solyc07g054200.4.1 | No alias | no hits & (original description: none) | 0.09 | Archaeplastida | |
Zm00001e018293_P001 | No alias | protein factor PRPF6/PRP1/STA1 of U5 small nuclear... | 0.03 | Archaeplastida | |
AT4G03430 | STA1, EMB2770 | pre-mRNA splicing factor-related | 0.03 | LandPlants | |
GSVIVT01030385001 | No alias | Protein STABILIZED1 OS=Arabidopsis thaliana | 0.04 | LandPlants | |
Gb_02940 | No alias | protein factor PRPF6/PRP1/STA1 of U5 small nuclear... | 0.03 | LandPlants | |
LOC_Os10g35550.1 | No alias | protein factor PRPF6/PRP1/STA1 of U5 small nuclear... | 0.01 | LandPlants | |
MA_18853g0010 | No alias | protein factor PRPF6/PRP1/STA1 of U5 small nuclear... | 0.02 | LandPlants | |
Pp3c24_11640V3.1 | No alias | pre-mRNA splicing factor-related | 0.02 | LandPlants | |
Solyc07g054200.4.1 | No alias | no hits & (original description: none) | 0.07 | LandPlants | |
Zm00001e018293_P001 | No alias | protein factor PRPF6/PRP1/STA1 of U5 small nuclear... | 0.03 | LandPlants |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000398 | mRNA splicing, via spliceosome | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR010491 | PRP1_N | 18 | 184 |
No external refs found! |