LOC_Os04g53860 (Os04g0630900)

Aliases : Os04g0630900

Description : 16.8.1.2 secondary metabolism.flavonoids.anthocyanins.anthocyanidin reductase Negative regulator of flavonoid biosynthesis, mutants accumulate flavonoid pigments in their seed coat, putative oxidoreductase. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. BANYULS (BAN)

Gene families : OG_01_0000010 (Gene family) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): LOC_Os04g53860
Cluster	HCCA cluster: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method
AT1G09480	No alias	NAD(P)-binding Rossmann-fold superfamily protein	0.02	Gene family
AT1G09500	No alias	NAD(P)-binding Rossmann-fold superfamily protein	0.02	Gene family
AT5G19440	No alias	NAD(P)-binding Rossmann-fold superfamily protein	0.02	Gene family
GSVIVT01000812001	No alias	16.2 secondary metabolism.phenylpropanoids...	0.02	Gene family
GSVIVT01011313001	No alias	26.11.1 misc.alcohol dehydrogenases.cinnamyl alcohol...	0.04	Gene family
GSVIVT01012378001	No alias	26.11.1 misc.alcohol dehydrogenases.cinnamyl alcohol...	0.03	Gene family
GSVIVT01012383001	No alias	26.11.1 misc.alcohol dehydrogenases.cinnamyl alcohol...	0.03	Gene family
GSVIVT01012392001	No alias	26.11.1 misc.alcohol dehydrogenases.cinnamyl alcohol...	0.03	Gene family
GSVIVT01012394001	No alias	26.11.1 misc.alcohol dehydrogenases.cinnamyl alcohol...	0.03	Gene family
GSVIVT01027601001	No alias	16.8.3.1 secondary...	0.02	Gene family
GSVIVT01027603001	No alias	16.8.3.1 secondary...	0.01	Gene family
GSVIVT01032178001	No alias	26.11.1 misc.alcohol dehydrogenases.cinnamyl alcohol...	0.03	Gene family
LOC_Os01g18120	Os01g0283700	16.2.1.7 secondary metabolism.phenylpropanoids.lignin...	0.02	Gene family
LOC_Os04g53810	Os04g0630400	16.8.1.2 secondary...	0.03	Gene family
LOC_Os04g53830	Os04g0630600	16.8.1.2 secondary...	0.03	Gene family
LOC_Os04g53850	Os04g0630800	16.8.1.2 secondary...	0.04	Gene family
LOC_Os04g53920	Os04g0631000	16.8.1.2 secondary...	0.04	Gene family
LOC_Os08g34280	Os08g0441500	16.2.1.7 secondary metabolism.phenylpropanoids.lignin...	0.01	Gene family
LOC_Os09g08720	Os09g0262000	16.2.1.7 secondary metabolism.phenylpropanoids.lignin...	0.03	Gene family
LOC_Os09g25150	Os09g0419200	16.2.1.7 secondary metabolism.phenylpropanoids.lignin...	0.01	Gene family
MA_10426542g0010	No alias	16.8.3.1 secondary...	0.03	Gene family
MA_10433570g0010	No alias	26.11.1 misc.alcohol dehydrogenases.cinnamyl alcohol...	0.01	Gene family
MA_10435810g0010	No alias	16.2 secondary metabolism.phenylpropanoids...	0.01	Gene family
MA_3254g0020	No alias	16.8.1.2 secondary...	0.02	Gene family
MA_8332697g0010	No alias	16.2.1.7 secondary metabolism.phenylpropanoids.lignin...	0.02	Gene family
Smo227661	PACid_15406323	16.2.1.7 secondary metabolism.phenylpropanoids.lignin...	0.02	Gene family
Solyc01g094070.3.1	Solyc01g094070.3	16.8.3.1 secondary...	0.04	Gene family
Zm00001d011438	GRMZM2G013726	16.8.3.1 secondary...	0.02	Gene family
Zm00001d019669	GRMZM2G131836	16.2.1.7 secondary metabolism.phenylpropanoids.lignin...	0.03	Gene family
Zm00001d020961	No alias	16.2 secondary metabolism.phenylpropanoids...	0.03	Gene family
Zm00001d046697	GRMZM2G033555	16.2 secondary metabolism.phenylpropanoids...	0.02	Gene family
Zm00001d050417	No alias	16.2.1.7 secondary metabolism.phenylpropanoids.lignin...	0.02	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEA	InterProScan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	IEA	InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
MF	GO:0016229	steroid dehydrogenase activity	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEA	InterProScan
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002225	3Beta_OHSteriod_DH/Estase	11	133

External Links

No external refs found!

LOC_Os04g53860 (Os04g0630900)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation