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Aliases : SEU
Description : Transcriptional corepressor SEUSS OS=Arabidopsis thaliana (sp|q8w234|seuss_arath : 372.0)
Gene families : OG0000747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000747_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G62090 | SLK2 | SEUSS-like 2 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g016540 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g086246 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g116252 | SLK2 | adapter component *(SEU/SLK) of transcriptional... | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g21250 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene69099.t1 | SEU, Aspi01Gene69099 | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.03G041400.1 | SEU, Ceric.03G041400 | adapter component *(SEU/SLK) of transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.33G034400.1 | SEU, Ceric.33G034400 | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_04695 | SLK2 | Probable transcriptional regulator SLK2 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_27183 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g41806 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05019 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06246 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| MA_12796g0010 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_208023g0010 | SLK2 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g15245 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g04706 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0091.g018829 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g19598 | No alias | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g059750.3.1 | SEU, Solyc06g059750 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g059760.3.1 | SEU, Solyc06g059760 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011073_P001 | SEU, Zm00001e011073 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e021381_P001 | SEU, Zm00001e021381 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
| BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
| CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR029005 | LIM-bd/SEUSS | 376 | 632 |
| No external refs found! |