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  5. Mp8g16590.1

Mp8g16590.1


Description : COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana (sp|q9m2z2|wdr5a_arath : 90.9)


Gene families : OG0008306 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008306_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g16590.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00252440 evm_27.TU.AmTr_v1... COMPASS-like H3K4 histone methylase component WDR5A... 0.1 OrthoFinder output from all 47 species
AT3G27640 No alias Transducin/WD40 repeat-like superfamily protein 0.1 OrthoFinder output from all 47 species
Aev_g08521 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Als_g15287 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.07 OrthoFinder output from all 47 species
Aspi01Gene04216.t1 Aspi01Gene04216 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.08 OrthoFinder output from all 47 species
Azfi_s0076.g037840 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
Ceric.16G026900.1 Ceric.16G026900 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001003.15 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre01.g036100 No alias No description available 0.05 OrthoFinder output from all 47 species
Dcu_g01530 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.1 OrthoFinder output from all 47 species
GSVIVT01032413001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.12 OrthoFinder output from all 47 species
Gb_09523 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os03g49200.1 LOC_Os03g49200 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Len_g14540 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.08 OrthoFinder output from all 47 species
MA_10429760g0020 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Msp_g14482 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Solyc02g086470.3.1 Solyc02g086470 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Spa_g10772 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Zm00001e012236_P003 Zm00001e012236 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000776 kinetochore IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 170 202
IPR001680 WD40_repeat 375 408
IPR001680 WD40_repeat 241 268
IPR001680 WD40_repeat 327 364
IPR001680 WD40_repeat 129 159
No external refs found!