1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp8g16460.1

Mp8g16460.1 (PTAC16)


Aliases : PTAC16

Description : TAC16 cofactor of plastid-encoded RNA polymerase


Gene families : OG0007234 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007234_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g16460.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00257120 PTAC16,... RNA biosynthesis.organelle machineries.RNA polymerase... 0.19 OrthoFinder output from all 47 species
AT3G46780 PTAC16 plastid transcriptionally active 16 0.24 OrthoFinder output from all 47 species
Adi_g011791 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.08 OrthoFinder output from all 47 species
Aev_g02347 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.11 OrthoFinder output from all 47 species
Ala_g09140 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.12 OrthoFinder output from all 47 species
Als_g03152 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.06 OrthoFinder output from all 47 species
Aob_g18050 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.11 OrthoFinder output from all 47 species
Aop_g68943 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.19 OrthoFinder output from all 47 species
Aspi01Gene18545.t1 PTAC16, Aspi01Gene18545 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.11 OrthoFinder output from all 47 species
Azfi_s0072.g036982 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.07 OrthoFinder output from all 47 species
Cba_g03987 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.1 OrthoFinder output from all 47 species
Ceric.19G051100.1 PTAC16, Ceric.19G051100 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.25 OrthoFinder output from all 47 species
Cre02.g081250 No alias No description available 0.11 OrthoFinder output from all 47 species
Dac_g08836 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.18 OrthoFinder output from all 47 species
Dcu_g01601 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.07 OrthoFinder output from all 47 species
Dde_g25352 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.19 OrthoFinder output from all 47 species
Ehy_g03814 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.09 OrthoFinder output from all 47 species
GSVIVT01024905001 PTAC16 RNA biosynthesis.organelle machineries.RNA polymerase... 0.11 OrthoFinder output from all 47 species
Gb_02666 PTAC16 TAC16 cofactor of plastid-encoded RNA polymerase 0.08 OrthoFinder output from all 47 species
LOC_Os05g22614.1 PTAC16, LOC_Os05g22614 TAC16 cofactor of plastid-encoded RNA polymerase 0.09 OrthoFinder output from all 47 species
Len_g15964 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.19 OrthoFinder output from all 47 species
Lfl_g39154 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.1 OrthoFinder output from all 47 species
MA_806g0020 PTAC16 TAC16 cofactor of plastid-encoded RNA polymerase 0.14 OrthoFinder output from all 47 species
Msp_g05519 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.06 OrthoFinder output from all 47 species
Nbi_g10293 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.19 OrthoFinder output from all 47 species
Ore_g05533 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.11 OrthoFinder output from all 47 species
Ore_g05534 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.13 OrthoFinder output from all 47 species
Pir_g07718 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.14 OrthoFinder output from all 47 species
Ppi_g01190 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014956 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.07 OrthoFinder output from all 47 species
Solyc06g005710.3.1 PTAC16, Solyc06g005710 TAC16 cofactor of plastid-encoded RNA polymerase 0.2 OrthoFinder output from all 47 species
Spa_g56471 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.1 OrthoFinder output from all 47 species
Tin_g08369 PTAC16 cofactor of plastid-encoded RNA polymerase *(TAC16) &... 0.19 OrthoFinder output from all 47 species
Zm00001e026770_P002 PTAC16, Zm00001e026770 TAC16 cofactor of plastid-encoded RNA polymerase 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 195 405
No external refs found!