- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : SWI3A, CHB1, ATSWI3A
Description : component BAF255/170 of chromatin remodeling complex
Gene families : OG0000817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000817_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00059p00072490 | CHB3, ATSWI3D,... | Chromatin organisation.chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G34430 | CHB3, ATSWI3D | DNA-binding family protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g003357 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g055176 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g117083 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g02056 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g16238 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g08555 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g02046 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g14378 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g15169 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.03G090000.1 | CHB4, SWI3C,... | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.17G074300.1 | CHB3, ATSWI3D,... | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G048000.1 | SWI3A, CHB1,... | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.22G071000.1 | CHB3, ATSWI3D,... | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.28G011200.1 | CHB2, SWI3B,... | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000388.52 | CHB4, SWI3C, ATSWI3C | Chromatin organisation.chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Cre08.g364050 | CHB3, ATSWI3D | Chromatin organisation.chromatin remodeling... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g11402 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g03107 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g00898 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g24188 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g09982 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01013428001 | CHB2, SWI3B, ATSWI3B | Chromatin organisation.chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_20384 | CHB3, ATSWI3D | component BAF255/170 of chromatin remodeling complex | 0.03 | OrthoFinder output from all 47 species | |
| Gb_22023 | CHB2, SWI3B, ATSWI3B | component BAF255/170 of chromatin remodeling complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g10060.1 | CHB2, SWI3B,... | component BAF255/170 of chromatin remodeling complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g01970.1 | CHB3, ATSWI3D,... | component BAF255/170 of chromatin remodeling complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g40420.1 | SWI3A, CHB1,... | component BAF255/170 of chromatin remodeling complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g08080.1 | CHB4, SWI3C,... | component BAF255/170 of chromatin remodeling complex | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g07730.1 | CHB4, SWI3C,... | component BAF255/170 of chromatin remodeling complex | 0.03 | OrthoFinder output from all 47 species | |
| Len_g14234 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g08236 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10426514g0020 | CHB4, SWI3C, ATSWI3C | component BAF255/170 of chromatin remodeling complex | 0.02 | OrthoFinder output from all 47 species | |
| MA_10432371g0010 | CHB3, ATSWI3D | component BAF255/170 of chromatin remodeling complex | 0.02 | OrthoFinder output from all 47 species | |
| MA_10432371g0020 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g10605 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g28434 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g01373 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g10930 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g13567 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g27615 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g01335 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006350 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07213 | No alias | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g19959 | No alias | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g109510.3.1 | CHB3, ATSWI3D,... | component BAF255/170 of chromatin remodeling complex | 0.05 | OrthoFinder output from all 47 species | |
| Solyc03g097450.4.1 | SWI3A, CHB1,... | component BAF255/170 of chromatin remodeling complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g082760.3.1 | CHB2, SWI3B,... | component BAF255/170 of chromatin remodeling complex | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g15980 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g30642 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g21307 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromaTin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g26033 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromaTin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e012143_P002 | CHB3, ATSWI3D,... | component BAF255/170 of chromatin remodeling complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e018409_P001 | CHB4, SWI3C,... | component BAF255/170 of chromatin remodeling complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e024548_P001 | CHB4, SWI3C,... | component BAF255/170 of chromatin remodeling complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000228 | nuclear chromosome | IEP | HCCA |
| BP | GO:0001510 | RNA methylation | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0016556 | mRNA modification | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0080009 | mRNA methylation | IEP | HCCA |
| No external refs found! |