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  5. Mp8g15580.1

Mp8g15580.1


Description : no hits & (original description: none)


Gene families : OG0004202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g15580.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Aev_g39927 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g12822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G003100.1 Ceric.23G003100 not classified & original description: pacid=50610792... 0.04 OrthoFinder output from all 47 species
Dcu_g12978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01038634001 No alias No description available 0.02 OrthoFinder output from all 47 species
Lfl_g17624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_2296g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g33149 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 742 774
IPR001680 WD40_repeat 613 668
IPR024764 TFIIIC_Znf 1079 1156
IPR024761 TFIIIC_delta_N 28 156
No external refs found!