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  5. Mp8g12430.1

Mp8g12430.1


Description : Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana (sp|q8h1q1|tl203_arath : 302.0)


Gene families : OG0006152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g12430.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AT1G12250 No alias Pentapeptide repeat-containing protein 0.06 OrthoFinder output from all 47 species
Adi_g015162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02920 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g04025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g58664 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Azfi_s0006.g009606 No alias not classified & original description: CDS=49-915 0.03 OrthoFinder output from all 47 species
Ceric.20G040100.1 Ceric.20G040100 not classified & original description: pacid=50565962... 0.03 OrthoFinder output from all 47 species
Cre17.g721700 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.05 OrthoFinder output from all 47 species
Dac_g13925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06102 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g11753 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01001267001 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Gb_01023 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os02g42960.1 LOC_Os02g42960 Thylakoid lumenal protein TL20.3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Msp_g07925 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g18142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c21_17930V3.1 Pp3c21_17930 Pentapeptide repeat-containing protein 0.03 OrthoFinder output from all 47 species
Ppi_g16845 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc08g079110.4.1 Solyc08g079110 Thylakoid lumenal protein TL20.3, chloroplastic... 0.05 OrthoFinder output from all 47 species
Spa_g08899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10553 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 177 212
IPR001646 5peptide_repeat 135 171
No external refs found!