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  5. Mp8g10830.1

Mp8g10830.1 (RPT3)


Aliases : RPT3

Description : regulatory component RPT3 of 26S proteasome


Gene families : OG0002973 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002973_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g10830.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AT5G58290 RPT3 regulatory particle triple-A ATPase 3 0.04 OrthoFinder output from all 47 species
Ala_g15061 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Als_g27997 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aop_g00613 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aop_g02515 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Azfi_s0021.g015701 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Cba_g53488 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Ceric.01G028300.1 RPT3, Ceric.01G028300 regulatory component *(RPT3) of 26S proteasome &... 0.07 OrthoFinder output from all 47 species
Ceric.36G025600.1 RPT3, Ceric.36G025600 regulatory component *(RPT3) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.46 RPT3 26S proteasome regulatory subunit 6B homolog... 0.08 OrthoFinder output from all 47 species
Cre09.g402450 RPT3 Protein degradation.26S proteasome.regulatory... 0.09 OrthoFinder output from all 47 species
Dac_g16904 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Dcu_g00998 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
GSVIVT01024544001 RPT3 Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
Gb_28081 RPT3 regulatory component RPT3 of 26S proteasome 0.03 OrthoFinder output from all 47 species
LOC_Os02g21970.1 RPT3, LOC_Os02g21970 regulatory component RPT3 of 26S proteasome 0.11 OrthoFinder output from all 47 species
MA_8965097g0010 RPT3 26S proteasome regulatory subunit 6B homolog... 0.04 OrthoFinder output from all 47 species
Msp_g01130 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Nbi_g12291 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ore_g18564 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Pnu_g12682 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Ppi_g15414 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Sam_g35578 No alias regulatory component *(RPT3) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Smo180600 RPT3 Protein degradation.26S proteasome.regulatory... 0.04 OrthoFinder output from all 47 species
Solyc06g082630.4.1 RPT3, Solyc06g082630 regulatory component RPT3 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Solyc06g082660.4.1 RPT3, Solyc06g082660 regulatory component RPT3 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Spa_g04802 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Zm00001e014107_P001 RPT3, Zm00001e014107 regulatory component RPT3 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Zm00001e022619_P001 RPT3, Zm00001e022619 regulatory component RPT3 of 26S proteasome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR032501 Prot_ATP_ID_OB_C 86 141
IPR003959 ATPase_AAA_core 199 332
IPR041569 AAA_lid_3 355 397
No external refs found!