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  5. Mp8g10040.1

Mp8g10040.1


Description : PsbP domain-containing protein 3, chloroplastic OS=Arabidopsis thaliana (sp|q9s720|ppd3_arath : 172.0)


Gene families : OG0006517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g10040.1

Target Alias Description ECC score Gene Family Method Actions
AT1G76450 No alias Photosystem II reaction center PsbP family protein 0.04 OrthoFinder output from all 47 species
Adi_g084610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38210 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g08526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G011400.1 Ceric.16G011400 not classified & original description: pacid=50589110... 0.04 OrthoFinder output from all 47 species
Cre10.g446350 No alias PsbP domain-containing protein 3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Dac_g03626 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12329 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g07431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013427001 No alias PsbP domain-containing protein 3, chloroplastic... 0.04 OrthoFinder output from all 47 species
LOC_Os08g40160.1 LOC_Os08g40160 PsbP domain-containing protein 3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Lfl_g05889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_135370g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g06533 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g08785 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0227.g026375 No alias not classified & original description: CDS=59-778 0.03 OrthoFinder output from all 47 species
Smo448162 No alias PsbP domain-containing protein 3, chloroplastic... 0.05 OrthoFinder output from all 47 species
Spa_g24667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003568_P001 Zm00001e003568 PsbP domain-containing protein 3, chloroplastic... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 134 291
No external refs found!