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  5. Mp8g06560.1

Mp8g06560.1


Description : Protein ALP1-like OS=Arabidopsis thaliana (sp|q9m2u3|alpl_arath : 123.0)


Gene families : OG0000284 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g06560.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g030966 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g26409 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g51358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04579 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g26805 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01035416001 No alias Protein ALP1-like OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os05g51520.1 LOC_Os05g51520 Protein ALP1-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g06988 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g13551 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04392 No alias chromatin-silencing modulator (ALP1) of PRC2 histone... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042274 ribosomal small subunit biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 199 367
No external refs found!