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  5. Mp8g04570.1

Mp8g04570.1 (At-RS41, RS41, ATRSP41)


Aliases : At-RS41, RS41, ATRSP41

Description : RS31/40/41 RNA splicing factor


Gene families : OG0002134 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g04570.1

Target Alias Description ECC score Gene Family Method Actions
Als_g04759 At-RS41, RS41, ATRSP41 RNA splicing factor *(RS31/40/41) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05673 At-RS41, RS41, ATRSP41 RNA splicing factor *(RS31/40/41) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0126.g048647 At-RS41, RS41, ATRSP41 RNA splicing factor *(RS31/40/41) & original... 0.04 OrthoFinder output from all 47 species
Ceric.03G035700.1 At-RS41, RS41,... RNA splicing factor *(RS31/40/41) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01010623001 At-RS41, RS41, ATRSP41 RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Gb_39834 At-RS41, RS41, ATRSP41 RS31/40/41 RNA splicing factor 0.03 OrthoFinder output from all 47 species
Nbi_g11720 At-RS41, RS41, ATRSP41 RNA splicing factor *(RS31/40/41) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g091750.3.1 At-RS41, RS41,... RS31/40/41 RNA splicing factor 0.03 OrthoFinder output from all 47 species
Solyc11g072340.2.1 At-RS41, RS41,... RS31/40/41 RNA splicing factor 0.03 OrthoFinder output from all 47 species
Spa_g04288 At-RS41, RS41, ATRSP41 RNA splicing factor *(RS31/40/41) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025270_P001 At-RS41, RS41,... RS31/40/41 RNA splicing factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 101 163
IPR000504 RRM_dom 7 66
No external refs found!