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  5. Mp8g03910.1

Mp8g03910.1


Description : component RPS29 of SSU proteome


Gene families : OG0008810 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008810_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g03910.1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AT3G43980 No alias Ribosomal protein S14p/S29e family protein 0.04 OrthoFinder output from all 47 species
AT3G44010 No alias Ribosomal protein S14p/S29e family protein 0.04 OrthoFinder output from all 47 species
AT4G33865 No alias Ribosomal protein S14p/S29e family protein 0.06 OrthoFinder output from all 47 species
Cre08.g358556 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 OrthoFinder output from all 47 species
Dac_g44969 No alias component *(uS14) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Dde_g19826 No alias component *(uS14) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
LOC_Os03g56241.1 LOC_Os03g56241 component RPS29 of SSU proteome 0.05 OrthoFinder output from all 47 species
LOC_Os11g41610.1 LOC_Os11g41610 component RPS29 of SSU proteome 0.06 OrthoFinder output from all 47 species
MA_10436379g0010 No alias component RPS29 of SSU proteome 0.07 OrthoFinder output from all 47 species
Pp3c14_10190V3.1 Pp3c14_10190 Ribosomal protein S14p/S29e family protein 0.08 OrthoFinder output from all 47 species
Pp3c2_6730V3.1 Pp3c2_6730 Ribosomal protein S14p/S29e family protein 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015037 No alias component *(uS14) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Solyc06g073430.4.1 Solyc06g073430 component RPS29 of SSU proteome 0.03 OrthoFinder output from all 47 species
Solyc11g020877.1.1 Solyc11g020877 component RPS29 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001209 Ribosomal_S14 7 56
No external refs found!