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  5. Mp7g18640.1

Mp7g18640.1


Description : SWC4 recruitment factor of SWR1 chromatin remodeling complex


Gene families : OG0003748 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003748_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g18640.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00249970 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Ceric.25G027000.1 Ceric.25G027000 recruitment factor of SWR1 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Cre03.g144907 No alias Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Dcu_g18112 No alias recruitment factor of SWR1 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01028167001 No alias Chromatin organisation.chromatin remodeling... 0.04 OrthoFinder output from all 47 species
LOC_Os05g46330.1 LOC_Os05g46330 SWC4 recruitment factor of SWR1 chromatin remodeling complex 0.03 OrthoFinder output from all 47 species
Lfl_g06078 No alias recruitment factor of SWR1 chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Ore_g09349 No alias recruitment factor of SWR1 chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Smo272178 No alias Chromatin organisation.chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Solyc01g079210.3.1 Solyc01g079210 SWC4 recruitment factor of SWR1 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
Zm00001e014015_P003 Zm00001e014015 SWC4 recruitment factor of SWR1 chromatin remodeling complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0031491 nucleosome binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080009 mRNA methylation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032563 DAMP1_SANT-like 103 176
No external refs found!