Mp7g18500.1 (ATH1, ATATH1, ABCA2)

Aliases : ATH1, ATATH1, ABCA2

Description : fatty acid transporter (ABCA). subfamily ABCA transporter

Gene families : OG0001787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001787_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp7g18500.1
Cluster	HCCA: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
AT3G47730	ATH1, ATATH1, ABCA2	ATP-binding cassette A2	0.02	OrthoFinder output from all 47 species
AT5G61690	ATH15, ATATH15	ABC2 homolog 15	0.04	OrthoFinder output from all 47 species
AT5G61730	ATH11, ATATH11	ABC2 homolog 11	0.04	OrthoFinder output from all 47 species
Als_g49348	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g09766	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.07	OrthoFinder output from all 47 species
Aspi01Gene36713.t1	ATH1, ATATH1,...	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene36721.t1	ATH1, ATATH1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0022.g016230	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: CDS=354-3422	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000057.66	ATH1, ATATH1, ABCA2	ABC transporter A family member 2 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020614.46	ABCA4, ATATH3	ABC transporter A family member 4 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cre14.g613950	ATH1, ATATH1, ABCA2	ABC transporter A family member 2 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
Dac_g10442	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g20236	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01008042001	ATH1, ATATH1, ABCA2	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Len_g24553	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g02291	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_10004022g0010	ATH15, ATATH15	ABC transporter A family member 11 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
Msp_g36286	ATH15, ATATH15	subfamily ABCA transporter & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g08430	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g34266	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g08580	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g06475	ATH15, ATATH15	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g08946	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010133	ATH1, ATATH1, ABCA2	not classified & original description: CDS=111-2057	0.02	OrthoFinder output from all 47 species
Sam_g25161	No alias	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Smo76005	ATH1, ATATH1, ABCA2	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Solyc03g113070.4.1	ATH1, ATATH1,...	fatty acid transporter (ABCA). subfamily ABCA transporter	0.04	OrthoFinder output from all 47 species
Zm00001e004192_P001	ATH1, ATATH1,...	fatty acid transporter (ABCA). subfamily ABCA transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	564	708

External Links

No external refs found!

Mp7g18500.1 (ATH1, ATATH1, ABCA2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation