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  5. Mp7g18420.1

Mp7g18420.1 (ATH7, ATATH7)


Aliases : ATH7, ATATH7

Description : subfamily ABCA transporter


Gene families : OG0001879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001879_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g18420.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00139590 ATH16, ATATH16,... ABC transporter A family member 12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G47740 ATATH2, ATH2, ABCA3 ABC2 homolog 2 0.03 OrthoFinder output from all 47 species
AT3G47770 ATH5, ATATH5, ABCA6 ABC2 homolog 5 0.03 OrthoFinder output from all 47 species
AT3G47780 ATATH6, ATH6 ABC2 homolog 6 0.05 OrthoFinder output from all 47 species
AT3G47790 ATH7, ATATH7 ABC2 homolog 7 0.02 OrthoFinder output from all 47 species
AT5G61700 ATH16, ATATH16 ABC2 homolog 16 0.03 OrthoFinder output from all 47 species
Aev_g01577 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38161 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04431 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0022.g016229 ATATH6, ATH6 subfamily ABCA transporter & original description: CDS=234-3275 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000057.67 ATATH4, ABCA5, ATH4 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Cre14.g618400 ATH7, ATATH7 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Cre17.g721000 ATH7, ATATH7 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Dac_g07523 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20095 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g30770.1 ATATH6, ATH6,... subfamily ABCA transporter 0.04 OrthoFinder output from all 47 species
LOC_Os08g30780.1 ATATH6, ATH6,... subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species
MA_119138g0010 ATATH6, ATH6 subfamily ABCA transporter 0.01 OrthoFinder output from all 47 species
Msp_g11278 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g03426 ATH7, ATATH7 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g10749 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g16539 No alias subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g113040.4.1 ATATH6, ATH6,... subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species
Zm00001e022344_P001 ATATH6, ATH6,... subfamily ABCA transporter 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 644 788
No external refs found!