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  5. Mp7g16800.1

Mp7g16800.1 (RecQl3, ATRECQ3)


Aliases : RecQl3, ATRECQ3

Description : ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana (sp|q9ft72|rql3_arath : 631.0)


Gene families : OG0000844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000844_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g16800.1

Target Alias Description ECC score Gene Family Method Actions
Als_g61410 RecQl3, ATRECQ3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0171.g055698 RecQl3, ATRECQ3 not classified & original description: CDS=1-1707 0.02 OrthoFinder output from all 47 species
Dcu_g06356 MED34, ATRECQ2, RECQL2 component *(MED34) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Ore_g36040 MED34, ATRECQ2, RECQL2 component *(MED34) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021122 MED34, ATRECQ2, RECQL2 not classified & original description: CDS=82-2226 0.02 OrthoFinder output from all 47 species
Sam_g25246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo41328 RecQl3, ATRECQ3 ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc08g074600.4.1 MED34, ATRECQ2,... component MED34 of MEDIATOR transcription co-activator complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 39 204
IPR032284 RecQ_Zn-bd 384 434
IPR001650 Helicase_C 243 348
No external refs found!