Mp7g16560.1 (UBP2, ATUBP2)

Aliases : UBP2, ATUBP2

Description : deubiquitinase (UBP1-2)

Gene families : OG0003367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003367_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp7g16560.1

Target	Alias	Description	ECC score	Gene Family Method
AT1G04860	UBP2, ATUBP2	ubiquitin-specific protease 2	0.02	OrthoFinder output from all 47 species
Adi_g019437	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g05528	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g07996	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g20619	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: none	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000403.102	UBP8	Protein degradation.peptidase families.cysteine-type...	0.02	OrthoFinder output from all 47 species
Cre12.g533250	UBP2, ATUBP2	No description available	0.03	OrthoFinder output from all 47 species
Dcu_g09668	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01021053001	UBP2, ATUBP2	Protein degradation.peptide tagging.Ubiquitin...	0.06	OrthoFinder output from all 47 species
LOC_Os09g32740.1	UBP2, ATUBP2,...	deubiquitinase (UBP1-2)	0.03	OrthoFinder output from all 47 species
Len_g12921	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g13491	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: none	0.06	OrthoFinder output from all 47 species
Ore_g37204	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020448	UBP2, ATUBP2	deubiquitinase *(UBP1-2) & original description: CDS=154-3663	0.02	OrthoFinder output from all 47 species
Solyc09g091930.3.1	UBP2, ATUBP2,...	deubiquitinase (UBP1-2)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0003980	UDP-glucose:glycoprotein glucosyltransferase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006366	transcription by RNA polymerase II	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001607	Znf_UBP	115	186
IPR001394	Peptidase_C19_UCH	273	1314

External Links

No external refs found!

Mp7g16560.1 (UBP2, ATUBP2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation