LOC_Os04g51440 (Os04g0604000)


Aliases : Os04g0604000

Description : 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin binding Arabidopsis thaliana VILLIN4 villin 4 (VLN4)


Gene families : OG_01_0000541 (Gene family) Phylogenetic Tree(s): OG0000541_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g51440
Cluster HCCA cluster: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT5G57320 VLN5 villin, putative 0.05 Gene family
Cpa|evm.model.tig00001366.21 No alias 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.01 Gene family
GSVIVT01029237001 No alias 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.02 Gene family
GSVIVT01033261001 No alias 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.02 Gene family
LOC_Os08g14230 Os08g0240800 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.04 Gene family
Solyc04g015830.3.1 Solyc04g015830.3 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.02 Gene family
Zm00001d029215 GRMZM2G081322 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.08 Gene family
Zm00001d042084 GRMZM2G047310 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.05 Gene family
Zm00001d047453 GRMZM2G323479,... 31.1.1.1.3 cell.organisation.cytoskeleton.actin.actin... 0.1 Gene family

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA InterProScan
BP GO:0007010 cytoskeleton organization IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 152 219
IPR007123 Gelsolin-like_dom 274 339
IPR007123 Gelsolin-like_dom 28 109
IPR007123 Gelsolin-like_dom 641 715
IPR003128 Villin_headpiece 911 946
No external refs found!