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  5. Mp7g16320.1

Mp7g16320.1 (PRT6)


Aliases : PRT6

Description : type-I-residues E3 ubiquitin ligase (PRT6)


Gene families : OG0003565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003565_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g16320.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00210330 PRT6,... Protein degradation.N-end rule pathway of targeted... 0.03 OrthoFinder output from all 47 species
AT5G02310 PRT6 proteolysis 6 0.1 OrthoFinder output from all 47 species
Aev_g08637 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.04 OrthoFinder output from all 47 species
Aev_g10474 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
Aev_g44805 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.05 OrthoFinder output from all 47 species
Ala_g11391 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.04 OrthoFinder output from all 47 species
Als_g05145 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.02 OrthoFinder output from all 47 species
Aob_g27314 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.07 OrthoFinder output from all 47 species
Aspi01Gene63013.t1 PRT6, Aspi01Gene63013 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene63014.t1 PRT6, Aspi01Gene63014 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene63015.t1 PRT6, Aspi01Gene63015 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene67141.t1 PRT6, Aspi01Gene67141 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
Ceric.29G053500.1 PRT6, Ceric.29G053500 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.04 OrthoFinder output from all 47 species
Ceric.32G042600.1 PRT6, Ceric.32G042600 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
Cre02.g089237 PRT6 Protein degradation.N-end rule pathway of targeted... 0.03 OrthoFinder output from all 47 species
Dac_g15533 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g37411 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g10040 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01034167001 PRT6 E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01034169001 PRT6 Protein degradation.N-end rule pathway of targeted... 0.08 OrthoFinder output from all 47 species
Gb_11947 PRT6 type-I-residues E3 ubiquitin ligase (PRT6) 0.1 OrthoFinder output from all 47 species
LOC_Os01g05500.2 PRT6, LOC_Os01g05500 type-I-residues E3 ubiquitin ligase (PRT6) 0.03 OrthoFinder output from all 47 species
Len_g57965 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g04298 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.05 OrthoFinder output from all 47 species
MA_10429079g0010 PRT6 E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10429118g0010 PRT6 type-I-residues E3 ubiquitin ligase (PRT6) 0.06 OrthoFinder output from all 47 species
MA_387g0010 PRT6 type-I-residues E3 ubiquitin ligase (PRT6) 0.04 OrthoFinder output from all 47 species
MA_767141g0010 PRT6 E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Msp_g15711 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.02 OrthoFinder output from all 47 species
Ore_g16132 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.05 OrthoFinder output from all 47 species
Pir_g25445 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.01 OrthoFinder output from all 47 species
Sam_g18069 No alias type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.05 OrthoFinder output from all 47 species
Smo438209 PRT6 Protein degradation.N-end rule pathway of targeted... 0.06 OrthoFinder output from all 47 species
Solyc09g010830.4.1 PRT6, Solyc09g010830 type-I-residues E3 ubiquitin ligase (PRT6) 0.05 OrthoFinder output from all 47 species
Solyc10g084760.3.1 PRT6, Solyc10g084760 type-I-residues E3 ubiquitin ligase (PRT6) 0.04 OrthoFinder output from all 47 species
Tin_g08431 PRT6 type-I-residues E3 ubiquiTin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e016914_P004 PRT6, Zm00001e016914 type-I-residues E3 ubiquitin ligase (PRT6) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR003126 Znf_UBR 136 202
No external refs found!