1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp7g15670.1

Mp7g15670.1 (SRCAP, PIE1, chr13)


Aliases : SRCAP, PIE1, chr13

Description : ATPase component PIE1 of SWR1 chromatin remodeling complex


Gene families : OG0002986 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002986_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g15670.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00085p00089520 SRCAP, PIE1,... Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder output from all 47 species
AT3G12810 SRCAP, PIE1, chr13 SNF2 domain-containing protein / helicase... 0.09 OrthoFinder output from all 47 species
Adi_g046504 SRCAP, PIE1, chr13 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g086891 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.06 OrthoFinder output from all 47 species
Aev_g17049 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.06 OrthoFinder output from all 47 species
Ala_g20021 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.06 OrthoFinder output from all 47 species
Ala_g21115 SRCAP, PIE1, chr13 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g04504 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.06 OrthoFinder output from all 47 species
Cba_g24692 SRCAP, PIE1, chr13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G011100.1 SRCAP, PIE1,... ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000194.25 SRCAP, PIE1, chr13 Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000194.26 SRCAP, PIE1, chr13 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.02 OrthoFinder output from all 47 species
Cre14.g618860 SRCAP, PIE1, chr13 Chromatin organisation.chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Dac_g12650 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Dcu_g08326 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.07 OrthoFinder output from all 47 species
Ehy_g22840 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
GSVIVT01033511001 SRCAP, PIE1, chr13 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.07 OrthoFinder output from all 47 species
Gb_30810 SRCAP, PIE1, chr13 ATPase component PIE1 of SWR1 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
LOC_Os02g46450.2 SRCAP, PIE1,... ATPase component PIE1 of SWR1 chromatin remodeling complex 0.03 OrthoFinder output from all 47 species
Len_g28435 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
MA_424432g0010 SRCAP, PIE1, chr13 ATPase component PIE1 of SWR1 chromatin remodeling complex 0.11 OrthoFinder output from all 47 species
MA_64269g0010 SRCAP, PIE1, chr13 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.09 OrthoFinder output from all 47 species
MA_9456975g0010 SRCAP, PIE1, chr13 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.06 OrthoFinder output from all 47 species
Msp_g15065 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Nbi_g13998 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Pir_g11854 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Pnu_g13821 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Sam_g11626 No alias ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Solyc03g063210.3.1 SRCAP, PIE1,... Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.03 OrthoFinder output from all 47 species
Solyc03g063220.2.1 SRCAP, PIE1,... ATPase component PIE1 of SWR1 chromatin remodeling complex 0.1 OrthoFinder output from all 47 species
Spa_g09110 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.06 OrthoFinder output from all 47 species
Tin_g20443 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromaTin remodeling... 0.05 OrthoFinder output from all 47 species
Zm00001e015483_P001 SRCAP, PIE1,... ATPase component PIE1 of SWR1 chromatin remodeling complex 0.09 OrthoFinder output from all 47 species
Zm00001e023267_P001 SRCAP, PIE1,... ATPase component PIE1 of SWR1 chromatin remodeling complex 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 1774 1885
IPR014012 HSA_dom 429 495
IPR000330 SNF2_N 1243 1517
No external refs found!