LOC_Os04g51350 (Os04g0602600)


Aliases : Os04g0602600

Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0010399 (Gene family) Phylogenetic Tree(s): OG0010399_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g51350
Cluster HCCA cluster: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
AT3G22150 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.09 Gene family
Solyc11g017370.2.1 Solyc11g017370.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
Zm00001d002421 GRMZM2G456123 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.1 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 585 632
IPR002885 Pentatricopeptide_repeat 278 322
IPR002885 Pentatricopeptide_repeat 176 217
IPR002885 Pentatricopeptide_repeat 484 529
IPR002885 Pentatricopeptide_repeat 560 584
IPR002885 Pentatricopeptide_repeat 458 479
IPR002885 Pentatricopeptide_repeat 356 382
IPR002885 Pentatricopeptide_repeat 384 414
No external refs found!