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  5. Mp7g15450.1

Mp7g15450.1 (CID4)


Aliases : CID4

Description : Polyadenylate-binding protein-interacting protein 4 OS=Arabidopsis thaliana (sp|q94am9|cid4_arath : 204.0)


Gene families : OG0002546 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002546_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g15450.1

Target Alias Description ECC score Gene Family Method Actions
AT3G14010 CID4 CTC-interacting domain 4 0.07 OrthoFinder output from all 47 species
Adi_g022441 CID4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g33923 CID4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02613 CID4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04903 CID4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07343 CID3 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g20165 CID4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g18076 CID4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008686 CID4 not classified & original description: CDS=246-2828 0.02 OrthoFinder output from all 47 species
Azfi_s1680.g105668 CID3 not classified & original description: CDS=419-2980 0.02 OrthoFinder output from all 47 species
Cba_g24223 CID4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.33G002100.1 CID3, Ceric.33G002100 not classified & original description: pacid=50607016... 0.03 OrthoFinder output from all 47 species
Cre01.g063997 CID4 Polyadenylate-binding protein-interacting protein 3... 0.02 OrthoFinder output from all 47 species
Dac_g15553 CID4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33488 CID4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16328 CID4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016786001 CID4 Polyadenylate-binding protein-interacting protein 3... 0.04 OrthoFinder output from all 47 species
Gb_00770 CID4 Polyadenylate-binding protein-interacting protein 4... 0.02 OrthoFinder output from all 47 species
LOC_Os02g27950.1 CID4, LOC_Os02g27950 Polyadenylate-binding protein-interacting protein 4... 0.02 OrthoFinder output from all 47 species
Len_g29292 CID3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07109 CID4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10437165g0010 CID4 Polyadenylate-binding protein-interacting protein 4... 0.03 OrthoFinder output from all 47 species
Msp_g13708 CID4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g25649 CID4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01414 CID3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09924 CID4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03955 CID4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14853 CID4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo411870 CID4 Polyadenylate-binding protein-interacting protein 4... 0.03 OrthoFinder output from all 47 species
Solyc03g121950.3.1 CID4, Solyc03g121950 Polyadenylate-binding protein-interacting protein 4... 0.02 OrthoFinder output from all 47 species
Tin_g11817 CID4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014564_P004 CID4, Zm00001e014564 Polyadenylate-binding protein-interacting protein 3... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR025852 SM_dom_ATX 106 192
IPR009604 LsmAD_domain 268 339
No external refs found!