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  5. Mp7g14840.1

Mp7g14840.1 (TAF5)


Aliases : TAF5

Description : component TAF5 of SAGA transcription co-activator complex. component TAF5 of TFIId basal transcription regulation complex


Gene families : OG0005768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005768_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g14840.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g007815 TAF5 component *(TAF5) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Aev_g29489 TAF5 component *(TAF5) of SAGA transcription co-activator... 0.01 OrthoFinder output from all 47 species
Als_g04392 TAF5 component *(TAF5) of SAGA transcription co-activator... 0.01 OrthoFinder output from all 47 species
Cba_g01226 TAF5 component *(TAF5) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Ceric.30G020600.1 TAF5, Ceric.30G020600 component *(TAF5) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Cre12.g526950 RID3 RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
Dde_g06316 TAF5 component *(TAF5) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
LOC_Os06g44030.1 TAF5, LOC_Os06g44030 component TAF5 of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Len_g09646 TAF5 component *(TAF5) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Pir_g04628 TAF5 component *(TAF5) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Sam_g10077 No alias component *(TAF5) of SAGA transcription co-activator... 0.01 OrthoFinder output from all 47 species
Sam_g38594 No alias component *(TAF5) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Solyc06g065700.3.1 TAF5, Solyc06g065700 component TAF5 of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Spa_g47403 TAF5 component *(TAF5) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 426 458
IPR001680 WD40_repeat 350 380
IPR001680 WD40_repeat 588 626
IPR001680 WD40_repeat 546 584
IPR001680 WD40_repeat 506 542
IPR001680 WD40_repeat 465 500
IPR007582 TFIID_NTD2 64 192
No external refs found!