Mp7g14740.1

Description : component psRPS20 of small ribosomal subunit proteome

Gene families : OG0006775 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006775_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp7g14740.1
Cluster	HCCA: Cluster_66

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00068p00188920	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.06	OrthoFinder output from all 47 species
AT3G15190	No alias	chloroplast 30S ribosomal protein S20, putative	0.16	OrthoFinder output from all 47 species
Adi_g045230	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Aev_g22835	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Ala_g08893	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.13	OrthoFinder output from all 47 species
Als_g08208	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.1	OrthoFinder output from all 47 species
Aob_g06235	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.11	OrthoFinder output from all 47 species
Aop_g03027	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.14	OrthoFinder output from all 47 species
Aspi01Gene68352.t1	Aspi01Gene68352	component *(bS20c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Azfi_s0228.g059056	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.2	OrthoFinder output from all 47 species
Cba_g11240	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Ceric.11G009600.1	Ceric.11G009600	component *(bS20c) of small plastid ribosomal-subunit...	0.24	OrthoFinder output from all 47 species
Cre12.g494750	No alias	Protein biosynthesis.organelle translation...	0.25	OrthoFinder output from all 47 species
Dac_g10899	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Dcu_g37258	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.14	OrthoFinder output from all 47 species
Dde_g15842	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Ehy_g11872	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.1	OrthoFinder output from all 47 species
GSVIVT01014290001	No alias	Protein biosynthesis.organelle translation...	0.2	OrthoFinder output from all 47 species
Gb_27504	No alias	component psRPS20 of small ribosomal subunit proteome	0.22	OrthoFinder output from all 47 species
LOC_Os01g48690.1	LOC_Os01g48690	component psRPS20 of small ribosomal subunit proteome	0.26	OrthoFinder output from all 47 species
Len_g00203	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.12	OrthoFinder output from all 47 species
Lfl_g00868	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.13	OrthoFinder output from all 47 species
MA_872747g0010	No alias	component psRPS20 of small ribosomal subunit proteome	0.08	OrthoFinder output from all 47 species
Msp_g05121	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Nbi_g03416	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.11	OrthoFinder output from all 47 species
Ore_g04849	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Pir_g10569	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Ppi_g26924	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.1	OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009139	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.09	OrthoFinder output from all 47 species
Sam_g20147	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.15	OrthoFinder output from all 47 species
Solyc07g062870.3.1	Solyc07g062870	component psRPS20 of small ribosomal subunit proteome	0.3	OrthoFinder output from all 47 species
Spa_g08226	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.16	OrthoFinder output from all 47 species
Spa_g08227	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.11	OrthoFinder output from all 47 species
Spa_g50703	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.26	OrthoFinder output from all 47 species
Tin_g10912	No alias	component *(bS20c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Zm00001e028066_P001	Zm00001e028066	component psRPS20 of small ribosomal subunit proteome	0.27	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006729	tetrahydrobiopterin biosynthetic process	IEP	HCCA
MF	GO:0008124	4-alpha-hydroxytetrahydrobiopterin dehydratase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
BP	GO:0019751	polyol metabolic process	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
BP	GO:0034311	diol metabolic process	IEP	HCCA
BP	GO:0034312	diol biosynthetic process	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	HCCA
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0046146	tetrahydrobiopterin metabolic process	IEP	HCCA
BP	GO:0046165	alcohol biosynthetic process	IEP	HCCA
BP	GO:0046173	polyol biosynthetic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002583	Ribosomal_S20	80	165

External Links

No external refs found!

Mp7g14740.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation