- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : U-box domain-containing protein 62 OS=Arabidopsis thaliana (sp|q6dbn5|pub62_arath : 172.0)
Gene families : OG0000864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000864_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G05230 | No alias | RING/U-box superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g020571 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g20302 | No alias | E3 ubiquitin ligase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g32250 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g16070 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g28677 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene48176.t1 | Aspi01Gene48176 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g17516 | No alias | E3 ubiquitin ligase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.28G062900.1 | Ceric.28G062900 | E3 ubiquitin ligase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.34G024200.1 | Ceric.34G024200 | E3 ubiquitin ligase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032672001 | No alias | U-box domain-containing protein 62 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Gb_06756 | No alias | U-box domain-containing protein 62 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_25729 | No alias | U-box domain-containing protein 62 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18974 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_109588g0010 | No alias | U-box domain-containing protein 62 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g12773 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g04513 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g05354 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g32791 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g17020 | No alias | E3 ubiquitin ligase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g24331 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo271651 | No alias | U-box domain-containing protein 62 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g009340.3.1 | Solyc04g009340 | U-box domain-containing protein 63 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g12947 | No alias | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006366 | transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006914 | autophagy | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| CC | GO:1902554 | serine/threonine protein kinase complex | IEP | HCCA |
| CC | GO:1902911 | protein kinase complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| CC | GO:1990316 | Atg1/ULK1 kinase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |