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  5. Mp7g14310.1

Mp7g14310.1


Description : C3H zinc finger transcription factor


Gene families : OG0005285 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005285_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g14310.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00036310 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Adi_g019649 No alias CWF19-type post-transcriptionally regulatory factor &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene29450.t1 Aspi01Gene29450 CWF19-type post-transcriptionally regulatory factor &... 0.02 OrthoFinder output from all 47 species
Ceric.13G021200.1 Ceric.13G021200 CWF19-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000691.5 No alias Zinc finger CCCH domain-containing protein 59 OS=Oryza... 0.01 OrthoFinder output from all 47 species
Cre07.g338900 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
LOC_Os09g19940.1 LOC_Os09g19940 C3H zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Sam_g09296 No alias CWF19-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Zm00001e033950_P001 Zm00001e033950 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019781 NEDD8 activating enzyme activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045116 protein neddylation IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 407 427
IPR006767 Cwf19-like_C_dom-2 578 652
IPR006768 Cwf19-like_C_dom-1 436 549
No external refs found!