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  5. Mp7g10170.1

Mp7g10170.1


Description : component F-box of SCF E3 ubiquitin ligase complex


Gene families : OG0000527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g10170.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00229380 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Adi_g001112 SKIP1 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Dde_g20905 FBW2 regulatory protein *(FBW2) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
GSVIVT01021579001 No alias F-box protein SKIP19 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os11g41860.1 LOC_Os11g41860 Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g17144 FBW2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48251 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18715 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Pir_g44703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16820 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Zm00001e027535_P001 Zm00001e027535 Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e039983_P001 Zm00001e039983 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 37 76
No external refs found!